RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 USHBP1Q8N6Y0 703 aa7.97□□□□□ -1.13
SSX3-201ENST00000298396 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
SSX3-201ENST00000298396 QTRT2Q9H974 415 aaKnown RBP7.97□□□□□ -1.13
SSX3-201ENST00000298396 IGSF1Q8N6C5 1336 aa7.97□□□□□ -1.13
SSX3-201ENST00000298396 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
SSX3-201ENST00000298396 DIEXFQ68CQ4 756 aaKnown RBP7.96□□□□□ -1.14
SSX3-201ENST00000298396 ZNF772Q68DY9 489 aaPredicted RBP7.96□□□□□ -1.14
SSX3-201ENST00000298396 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
SSX3-201ENST00000298396 ZC3H15Q8WU90 426 aaKnown RBP7.96□□□□□ -1.14
SSX3-201ENST00000298396 EYA1Q99502 592 aa7.96□□□□□ -1.14
SSX3-201ENST00000298396 CARD10Q9BWT7 1032 aa7.96□□□□□ -1.14
SSX3-201ENST00000298396 TRPC5Q9UL62 973 aaPredicted RBP7.96□□□□□ -1.14
SSX3-201ENST00000298396 KDRP35968 1356 aa7.96□□□□□ -1.14
SSX3-201ENST00000298396 DOT1LQ8TEK3 1739 aa7.95□□□□□ -1.14
SSX3-201ENST00000298396 SIPA1L3O60292 1781 aaPredicted RBP7.95□□□□□ -1.14
SSX3-201ENST00000298396 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
SSX3-201ENST00000298396 ZDHHC16Q969W1 377 aa7.95□□□□□ -1.14
SSX3-201ENST00000298396 GJD4Q96KN9 370 aaPredicted RBP7.95□□□□□ -1.14
SSX3-201ENST00000298396 BCL2L12Q9HB09 334 aa7.95□□□□□ -1.14
SSX3-201ENST00000298396 ADAMTS7Q9UKP4 1686 aa7.95□□□□□ -1.14
SSX3-201ENST00000298396 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
SSX3-201ENST00000298396 ZMYND10O75800 440 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 EVA1CP58658 441 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 FAM98CQ17RN3 349 aaKnown RBP7.94□□□□□ -1.14
SSX3-201ENST00000298396 TOM1L2Q6ZVM7 507 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 GPIHBP1Q8IV16 184 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 ZNF454Q8N9F8 522 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 NLRP2Q9NX02 1062 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 USP35Q9P2H5 1018 aa7.94□□□□□ -1.14
SSX3-201ENST00000298396 TNS1Q9HBL0 1735 aaKnown RBP7.94□□□□□ -1.14
SSX3-201ENST00000298396 ANP32CO43423 234 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 ONECUT3O60422 494 aaPredicted RBP7.93□□□□□ -1.14
SSX3-201ENST00000298396 DIAPH1O60610 1272 aaKnown RBP7.93□□□□□ -1.14
SSX3-201ENST00000298396 CSB-PGBD3P0DP91 1061 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 RBM6P78332 1123 aaKnown RBP7.93□□□□□ -1.14
SSX3-201ENST00000298396 PPP4R3BQ5MIZ7 849 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 BARGINQ6ZT62 677 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 TCP11L2Q8N4U5 519 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 ADAM33Q9BZ11 813 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 NPDC1Q9NQX5 325 aaPredicted RBP7.93□□□□□ -1.14
SSX3-201ENST00000298396 TNS2Q63HR2 1409 aa7.93□□□□□ -1.14
SSX3-201ENST00000298396 BTAF1O14981 1849 aa7.92□□□□□ -1.14
SSX3-201ENST00000298396 PTGDRQ13258 359 aa7.92□□□□□ -1.14
SSX3-201ENST00000298396 THRAP3Q9Y2W1 955 aaKnown RBP7.92□□□□□ -1.14
SSX3-201ENST00000298396 CCDC9Q9Y3X0 531 aaKnown RBP7.92□□□□□ -1.14
SSX3-201ENST00000298396 NHSQ6T4R5 1651 aa7.92□□□□□ -1.14
SSX3-201ENST00000298396 HMOX1P09601 288 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 RXRBP28702 533 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 SULT6B1Q6IMI4 303 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 ILDR2Q71H61 639 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 RSPH6AQ9H0K4 717 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 CDHR5Q9HBB8 845 aa7.91□□□□□ -1.14
SSX3-201ENST00000298396 FCHSD2O94868 740 aa7.9□□□□□ -1.14
SSX3-201ENST00000298396 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
SSX3-201ENST00000298396 IL2RBP14784 551 aa7.9□□□□□ -1.14
SSX3-201ENST00000298396 HIC1Q14526 733 aa7.9□□□□□ -1.14
SSX3-201ENST00000298396 TSR1Q2NL82 804 aaKnown RBP7.9□□□□□ -1.14
SSX3-201ENST00000298396 C6orf132Q5T0Z8 1188 aa7.9□□□□□ -1.14
SSX3-201ENST00000298396 FAM163AQ96GL9 167 aaPredicted RBP7.9□□□□□ -1.14
SSX3-201ENST00000298396 CFAP53Q96M91 514 aa7.9□□□□□ -1.14
SSX3-201ENST00000298396 PLEKHF1Q96S99 279 aa7.9□□□□□ -1.14
SSX3-201ENST00000298396 PAPPAQ13219 1627 aa7.89□□□□□ -1.15
SSX3-201ENST00000298396 U2SURPO15042 1029 aaKnown RBP7.89□□□□□ -1.15
SSX3-201ENST00000298396 MAP3K7O43318 606 aa7.89□□□□□ -1.15
SSX3-201ENST00000298396 EMP3P54852 163 aa7.89□□□□□ -1.15
SSX3-201ENST00000298396 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
SSX3-201ENST00000298396 TTC13Q8NBP0 860 aa7.89□□□□□ -1.15
SSX3-201ENST00000298396 PNISRQ8TF01 805 aaKnown RBP7.89□□□□□ -1.15
SSX3-201ENST00000298396 PHACTR3Q96KR7 559 aa7.89□□□□□ -1.15
SSX3-201ENST00000298396 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
SSX3-201ENST00000298396 KDM6AO15550 1401 aaPredicted RBP7.88□□□□□ -1.15
SSX3-201ENST00000298396 PLEKHG2Q9H7P9 1386 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 POTEB3A0JP26 581 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 CYP27B1O15528 508 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 U2AF1L5P0DN76 240 aaPredicted RBP7.88□□□□□ -1.15
SSX3-201ENST00000298396 PRKAR2BP31323 418 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 U2AF1Q01081 240 aaKnown RBP eCLIP7.88□□□□□ -1.15
SSX3-201ENST00000298396 FAM182BQ5T319 152 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 POTEBQ6S5H4 581 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 POTEEQ6S8J3 1075 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 ADAMTS8Q9UP79 889 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 UBR2Q8IWV8 1755 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 LY75O60449 1722 aa7.88□□□□□ -1.15
SSX3-201ENST00000298396 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 KDM3BQ7LBC6 1761 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 PPP1R3GB7ZBB8 358 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 CCER2I3L3R5 266 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 GNPATO15228 680 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 TATP17735 454 aaPredicted RBP7.87□□□□□ -1.15
SSX3-201ENST00000298396 ZNF687Q8N1G0 1237 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 RAPGEF4Q8WZA2 1011 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 MARVELD3Q96A59 401 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
SSX3-201ENST00000298396 MRC1P22897 1456 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 RGPD3A6NKT7 1758 aaPredicted RBP7.87□□□□□ -1.15
SSX3-201ENST00000298396 RGPD4Q7Z3J3 1758 aa7.87□□□□□ -1.15
SSX3-201ENST00000298396 BCL9O00512 1426 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 PBX2P40425 430 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms