RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
COL1A2-201ENST00000297268 CCDC8Q9H0W5 538 aaPredicted RBP16.55■□□□□ 0.24
COL1A2-201ENST00000297268 TMX1Q9H3N1 280 aa16.55■□□□□ 0.24
COL1A2-201ENST00000297268 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
COL1A2-201ENST00000297268 KLHL10Q6JEL2 608 aa16.55■□□□□ 0.24
COL1A2-201ENST00000297268 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
COL1A2-201ENST00000297268 SHTN1A0MZ66 631 aa16.55■□□□□ 0.24
COL1A2-201ENST00000297268 SDSP20132 328 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
COL1A2-201ENST00000297268 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
COL1A2-201ENST00000297268 IL16Q14005 1332 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
COL1A2-201ENST00000297268 HMGB1P09429 215 aaKnown RBP16.54■□□□□ 0.24
COL1A2-201ENST00000297268 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
COL1A2-201ENST00000297268 RAB3GAP1Q15042 981 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 TAX1BP1Q86VP1 789 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
COL1A2-201ENST00000297268 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
COL1A2-201ENST00000297268 NME9Q86XW9 330 aa16.53■□□□□ 0.24
COL1A2-201ENST00000297268 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
COL1A2-201ENST00000297268 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
COL1A2-201ENST00000297268 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
COL1A2-201ENST00000297268 USP48Q86UV5 1035 aa16.53■□□□□ 0.24
COL1A2-201ENST00000297268 BIN1O00499 593 aa16.53■□□□□ 0.24
COL1A2-201ENST00000297268 SEC24BO95487 1268 aa16.52■□□□□ 0.24
COL1A2-201ENST00000297268 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.24
COL1A2-201ENST00000297268 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
COL1A2-201ENST00000297268 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.24
COL1A2-201ENST00000297268 SOGA3Q5TF21 947 aa16.52■□□□□ 0.24
COL1A2-201ENST00000297268 CCT2P78371 535 aaKnown RBP16.52■□□□□ 0.23
COL1A2-201ENST00000297268 SMC5Q8IY18 1101 aa16.52■□□□□ 0.23
COL1A2-201ENST00000297268 TAF4BQ92750 862 aa16.52■□□□□ 0.23
COL1A2-201ENST00000297268 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.23
COL1A2-201ENST00000297268 NEFHP12036 1026 aa16.52■□□□□ 0.23
COL1A2-201ENST00000297268 FLIIQ13045 1269 aa16.52■□□□□ 0.23
COL1A2-201ENST00000297268 ZNF397Q8NF99 534 aaPredicted RBP16.52■□□□□ 0.23
COL1A2-201ENST00000297268 EVI5LQ96CN4 794 aa16.52■□□□□ 0.23
COL1A2-201ENST00000297268 CAVIN2O95810 425 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 NSD2O96028 1365 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 CPLX3Q8WVH0 158 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 ENOX2Q16206 610 aaKnown RBP16.51■□□□□ 0.23
COL1A2-201ENST00000297268 DNAAF4Q8WXU2 420 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 MCM3P25205 808 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
COL1A2-201ENST00000297268 SPA17Q15506 151 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 KRT222Q8N1A0 295 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
COL1A2-201ENST00000297268 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
COL1A2-201ENST00000297268 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 RAI14Q9P0K7 980 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 TNNQ9UQP3 1299 aa16.5■□□□□ 0.23
COL1A2-201ENST00000297268 SSBP05455 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
COL1A2-201ENST00000297268 CCDC186Q7Z3E2 898 aa16.49■□□□□ 0.23
COL1A2-201ENST00000297268 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
COL1A2-201ENST00000297268 IFIT1P09914 478 aaKnown RBP16.49■□□□□ 0.23
COL1A2-201ENST00000297268 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
COL1A2-201ENST00000297268 CCDC150Q8NCX0 1101 aa16.49■□□□□ 0.23
COL1A2-201ENST00000297268 ANO6Q4KMQ2 910 aa16.49■□□□□ 0.23
COL1A2-201ENST00000297268 RRAGDQ9NQL2 400 aaPredicted RBP16.49■□□□□ 0.23
COL1A2-201ENST00000297268 PTPRKQ15262 1439 aa16.49■□□□□ 0.23
COL1A2-201ENST00000297268 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 BMP2KQ9NSY1 1161 aaPredicted RBP16.48■□□□□ 0.23
COL1A2-201ENST00000297268 FAM135AQ9P2D6 1515 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 SEPT7Q16181 437 aaKnown RBP16.48■□□□□ 0.23
COL1A2-201ENST00000297268 LMAN1P49257 510 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 GIMAP7Q8NHV1 300 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
COL1A2-201ENST00000297268 MYD88Q99836 296 aa16.48■□□□□ 0.23
COL1A2-201ENST00000297268 SEPT11Q9NVA2 429 aaKnown RBP16.48■□□□□ 0.23
COL1A2-201ENST00000297268 CUL7Q14999 1698 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 GOLGA6L9A6NEM1 432 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■■ 96.1
COL1A2-201ENST00000297268 RLBP1P12271 317 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 TIGD1Q96MW7 591 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 ATP2B2Q01814 1243 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
COL1A2-201ENST00000297268 ASXL1Q8IXJ9 1541 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 SKILP12757 684 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 PDE1AP54750 535 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 ISM2Q6H9L7 571 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 PPP1R42Q7Z4L9 355 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 SMARCC1Q92922 1105 aaPredicted RBP16.46■□□□□ 0.23
COL1A2-201ENST00000297268 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
COL1A2-201ENST00000297268 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms