RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 FSD2A1L4K1 749 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 UPF3BQ9BZI7 483 aaKnown RBP12.08□□□□□ -0.48
HMGCR-201ENST00000287936 SPG7Q9UQ90 795 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 ATF3P18847 181 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
HMGCR-201ENST00000287936 AACSQ86V21 672 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 KIF3AQ9Y496 699 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 PDIA4P13667 645 aaKnown RBP12.07□□□□□ -0.48
HMGCR-201ENST00000287936 HSP90B1P14625 803 aaKnown RBP12.07□□□□□ -0.48
HMGCR-201ENST00000287936 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
HMGCR-201ENST00000287936 CCDC39Q9UFE4 941 aa12.07□□□□□ -0.48
HMGCR-201ENST00000287936 INTS4Q96HW7 963 aaKnown RBP12.07□□□□□ -0.48
HMGCR-201ENST00000287936 SSH2Q76I76 1423 aa12.07□□□□□ -0.48
HMGCR-201ENST00000287936 ECHDC1Q9NTX5 307 aa12.06□□□□□ -0.48
HMGCR-201ENST00000287936 ZRSR1Q15695 479 aaKnown RBP12.06□□□□□ -0.48
HMGCR-201ENST00000287936 LARP1Q6PKG0 1096 aaKnown RBP12.06□□□□□ -0.48
HMGCR-201ENST00000287936 CRB1P82279 1406 aa12.06□□□□□ -0.48
HMGCR-201ENST00000287936 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
HMGCR-201ENST00000287936 PDCP20941 246 aa12.06□□□□□ -0.48
HMGCR-201ENST00000287936 IL17REQ8NFR9 667 aa12.06□□□□□ -0.48
HMGCR-201ENST00000287936 VPS37CA5D8V6 355 aaPredicted RBP12.05□□□□□ -0.48
HMGCR-201ENST00000287936 CLCN1P35523 988 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 ANKRD1Q15327 319 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
HMGCR-201ENST00000287936 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
HMGCR-201ENST00000287936 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
HMGCR-201ENST00000287936 PNMA6EA0A0J9YXQ4 647 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 PDRG1Q9NUG6 133 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
HMGCR-201ENST00000287936 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
HMGCR-201ENST00000287936 GOLGA6L6A8MZA4 724 aa12.04□□□□□ -0.48
HMGCR-201ENST00000287936 CD2BP2O95400 341 aaKnown RBP12.04□□□□□ -0.48
HMGCR-201ENST00000287936 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
HMGCR-201ENST00000287936 SH2B1Q9NRF2 756 aaPredicted RBP12.04□□□□□ -0.48
HMGCR-201ENST00000287936 KSR2Q6VAB6 950 aa12.04□□□□□ -0.48
HMGCR-201ENST00000287936 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
HMGCR-201ENST00000287936 EVI5LQ96CN4 794 aa12.04□□□□□ -0.48
HMGCR-201ENST00000287936 JAKMIP1Q96N16 626 aaKnown RBP12.04□□□□□ -0.48
HMGCR-201ENST00000287936 LRRFIP1Q32MZ4 808 aaKnown RBP12.04□□□□□ -0.48
HMGCR-201ENST00000287936 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
HMGCR-201ENST00000287936 STAP2Q9UGK3 403 aa12.04□□□□□ -0.48
HMGCR-201ENST00000287936 CASTP20810 708 aaKnown RBP12.03□□□□□ -0.48
HMGCR-201ENST00000287936 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
HMGCR-201ENST00000287936 NCOA3Q9Y6Q9 1424 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 KDRP35968 1356 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 KIF2CQ99661 725 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 USP44Q9H0E7 712 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 SYCE3A1L190 88 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 EIF4A1P60842 406 aaKnown RBP12.03□□□□□ -0.48
HMGCR-201ENST00000287936 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 H3BQV1 296 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
HMGCR-201ENST00000287936 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
HMGCR-201ENST00000287936 RNMTO43148 476 aaKnown RBP12.02□□□□□ -0.48
HMGCR-201ENST00000287936 TPM2P07951 284 aa12.02□□□□□ -0.49
HMGCR-201ENST00000287936 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
HMGCR-201ENST00000287936 ANXA1P04083 346 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 ZNF445P59923 1031 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 PRPF40BQ6NWY9 871 aaKnown RBP12.01□□□□□ -0.49
HMGCR-201ENST00000287936 LRSAM1Q6UWE0 723 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 LINS1Q8NG48 757 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 SIL1Q9H173 461 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 KNDC1Q76NI1 1749 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 FIBPO43427 364 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 KRT32Q14532 448 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 TAF7LQ5H9L4 462 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 GCP02774 474 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 MYL6BP14649 208 aa12.01□□□□□ -0.49
HMGCR-201ENST00000287936 LRRC59Q96AG4 307 aaKnown RBP12.01□□□□□ -0.49
HMGCR-201ENST00000287936 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
HMGCR-201ENST00000287936 DRC7Q8IY82 874 aa12□□□□□ -0.49
HMGCR-201ENST00000287936 ZC3H6P61129 1189 aaKnown RBP12□□□□□ -0.49
HMGCR-201ENST00000287936 LMBRD1Q9NUN5 540 aa12□□□□□ -0.49
HMGCR-201ENST00000287936 GRM8O00222 908 aa12□□□□□ -0.49
HMGCR-201ENST00000287936 CABP4P57796 275 aa12□□□□□ -0.49
HMGCR-201ENST00000287936 LGR6Q9HBX8 967 aa12□□□□□ -0.49
HMGCR-201ENST00000287936 MON2Q7Z3U7 1717 aa12□□□□□ -0.49
HMGCR-201ENST00000287936 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 SGSM2O43147 1006 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 HSP90AA2PQ14568 343 aaPredicted RBP11.99□□□□□ -0.49
HMGCR-201ENST00000287936 CCDC183Q5T5S1 534 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 RRAGDQ9NQL2 400 aaPredicted RBP11.99□□□□□ -0.49
HMGCR-201ENST00000287936 RAD50Q92878 1312 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 DDIT3P35638 169 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 KRT85P78386 507 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms