RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 SYTL4Q96C24 671 aaPredicted RBP23.33■■□□□ 1.33
NIFK-201ENST00000285814 TMEM57Q8N5G2 664 aa23.33■■□□□ 1.32
NIFK-201ENST00000285814 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
NIFK-201ENST00000285814 PTCD1O75127 700 aaKnown RBP23.31■■□□□ 1.32
NIFK-201ENST00000285814 ACSBG1Q96GR2 724 aa23.31■■□□□ 1.32
NIFK-201ENST00000285814 USP16Q9Y5T5 823 aa23.31■■□□□ 1.32
NIFK-201ENST00000285814 AAMPQ13685 434 aa23.3■■□□□ 1.32
NIFK-201ENST00000285814 VSIG10Q8N0Z9 540 aa23.3■■□□□ 1.32
NIFK-201ENST00000285814 ITPRIPQ8IWB1 547 aa23.3■■□□□ 1.32
NIFK-201ENST00000285814 DDX21Q9NR30 783 aaKnown RBP eCLIP23.3■■□□□ 1.32
NIFK-201ENST00000285814 DDX19BQ9UMR2 479 aa23.3■■□□□ 1.32
NIFK-201ENST00000285814 NHSQ6T4R5 1651 aa23.29■■□□□ 1.32
NIFK-201ENST00000285814 N4BP2Q86UW6 1770 aaPredicted RBP23.29■■□□□ 1.32
NIFK-201ENST00000285814 PDIA6Q15084 440 aa23.29■■□□□ 1.32
NIFK-201ENST00000285814 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
NIFK-201ENST00000285814 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
NIFK-201ENST00000285814 PROSER3Q2NL68 480 aa23.28■■□□□ 1.32
NIFK-201ENST00000285814 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
NIFK-201ENST00000285814 FKBP5Q13451 457 aaPredicted RBP23.28■■□□□ 1.32
NIFK-201ENST00000285814 CCDC136Q96JN2 1154 aa23.28■■□□□ 1.32
NIFK-201ENST00000285814 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
NIFK-201ENST00000285814 PXDNLA1KZ92 1463 aa23.27■■□□□ 1.32
NIFK-201ENST00000285814 BRWD3Q6RI45 1802 aa23.27■■□□□ 1.32
NIFK-201ENST00000285814 ANXA1P04083 346 aa23.27■■□□□ 1.32
NIFK-201ENST00000285814 RBM6P78332 1123 aaKnown RBP23.27■■□□□ 1.32
NIFK-201ENST00000285814 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
NIFK-201ENST00000285814 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
NIFK-201ENST00000285814 SBF2Q86WG5 1849 aa23.26■■□□□ 1.31
NIFK-201ENST00000285814 TJP1Q07157 1748 aa23.26■■□□□ 1.31
NIFK-201ENST00000285814 KCNQ2O43526 872 aa23.25■■□□□ 1.31
NIFK-201ENST00000285814 LRP10Q7Z4F1 713 aa23.25■■□□□ 1.31
NIFK-201ENST00000285814 TEX13AQ9BXU3 409 aaPredicted RBP23.25■■□□□ 1.31
NIFK-201ENST00000285814 F6X3S4 739 aa23.24■■□□□ 1.31
NIFK-201ENST00000285814 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
NIFK-201ENST00000285814 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
NIFK-201ENST00000285814 BTAF1O14981 1849 aa23.23■■□□□ 1.31
NIFK-201ENST00000285814 ZNF831Q5JPB2 1677 aa23.23■■□□□ 1.31
NIFK-201ENST00000285814 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
NIFK-201ENST00000285814 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
NIFK-201ENST00000285814 SMARCC1Q92922 1105 aaPredicted RBP23.22■■□□□ 1.31
NIFK-201ENST00000285814 CHMP4BQ9H444 224 aaKnown RBP23.22■■□□□ 1.31
NIFK-201ENST00000285814 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
NIFK-201ENST00000285814 ADCY9O60503 1353 aa23.21■■□□□ 1.31
NIFK-201ENST00000285814 PALLDQ8WX93 1383 aa23.21■■□□□ 1.31
NIFK-201ENST00000285814 ZBTB7BO15156 539 aaPredicted RBP23.21■■□□□ 1.31
NIFK-201ENST00000285814 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
NIFK-201ENST00000285814 NBPF26B4DH59 902 aa23.2■■□□□ 1.3
NIFK-201ENST00000285814 MYL6BP14649 208 aa23.2■■□□□ 1.3
NIFK-201ENST00000285814 NBPF14Q5TI25 921 aa23.2■■□□□ 1.3
NIFK-201ENST00000285814 NBPF10Q6P3W6 841 aaKnown RBP23.2■■□□□ 1.3
NIFK-201ENST00000285814 NBPF15Q8N660 670 aa23.2■■□□□ 1.3
NIFK-201ENST00000285814 SLC4A10Q6U841 1118 aa23.19■■□□□ 1.3
NIFK-201ENST00000285814 PI4KAP2A4QPH2 592 aa23.19■■□□□ 1.3
NIFK-201ENST00000285814 KRT27Q7Z3Y8 459 aa23.19■■□□□ 1.3
NIFK-201ENST00000285814 PI4KAP1Q8N8J0 262 aa23.19■■□□□ 1.3
NIFK-201ENST00000285814 RGS17Q9UGC6 210 aaPredicted RBP23.19■■□□□ 1.3
NIFK-201ENST00000285814 STARD3NLO95772 234 aa23.18■■□□□ 1.3
NIFK-201ENST00000285814 A1BGP04217 495 aa23.18■■□□□ 1.3
NIFK-201ENST00000285814 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
NIFK-201ENST00000285814 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
NIFK-201ENST00000285814 LOC102724428A0A0B4J2F2 783 aa23.17■■□□□ 1.3
NIFK-201ENST00000285814 DDX58O95786 925 aaKnown RBP23.17■■□□□ 1.3
NIFK-201ENST00000285814 PIP4K2AP48426 406 aaPredicted RBP23.17■■□□□ 1.3
NIFK-201ENST00000285814 SIK1P57059 783 aa23.17■■□□□ 1.3
NIFK-201ENST00000285814 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
NIFK-201ENST00000285814 XAGE3Q8WTP9 111 aa23.17■■□□□ 1.3
NIFK-201ENST00000285814 CYP19A1P11511 503 aaPredicted RBP23.16■■□□□ 1.3
NIFK-201ENST00000285814 COPS6Q7L5N1 327 aa23.16■■□□□ 1.3
NIFK-201ENST00000285814 PTF1AQ7RTS3 328 aa23.16■■□□□ 1.3
NIFK-201ENST00000285814 RXRBP28702 533 aa23.16■■□□□ 1.3
NIFK-201ENST00000285814 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
NIFK-201ENST00000285814 RREB1Q92766 1687 aa23.15■■□□□ 1.3
NIFK-201ENST00000285814 AIMP1Q12904 312 aaKnown RBP23.15■■□□□ 1.3
NIFK-201ENST00000285814 MAP3K2Q9Y2U5 619 aa23.15■■□□□ 1.3
NIFK-201ENST00000285814 COL5A3P25940 1745 aaPredicted RBP23.15■■□□□ 1.3
NIFK-201ENST00000285814 ARFGEF2Q9Y6D5 1785 aa23.14■■□□□ 1.3
NIFK-201ENST00000285814 FAM196AQ6ZSG2 479 aa23.14■■□□□ 1.3
NIFK-201ENST00000285814 KDM2BQ8NHM5 1336 aa23.14■■□□□ 1.29
NIFK-201ENST00000285814 LY75O60449 1722 aa23.13■■□□□ 1.29
NIFK-201ENST00000285814 ATP6V1AP38606 617 aa23.13■■□□□ 1.29
NIFK-201ENST00000285814 BEND3Q5T5X7 828 aa23.13■■□□□ 1.29
NIFK-201ENST00000285814 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
NIFK-201ENST00000285814 BCL11BQ9C0K0 894 aaPredicted RBP23.12■■□□□ 1.29
NIFK-201ENST00000285814 ITPK1Q13572 414 aa23.11■■□□□ 1.29
NIFK-201ENST00000285814 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
NIFK-201ENST00000285814 MEIS3Q99687 375 aa23.11■■□□□ 1.29
NIFK-201ENST00000285814 SRCIN1Q9C0H9 1055 aa23.11■■□□□ 1.29
NIFK-201ENST00000285814 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
NIFK-201ENST00000285814 RIC3Q7Z5B4 369 aa23.11■■□□□ 1.29
NIFK-201ENST00000285814 CENPQQ7L2Z9 268 aaPredicted RBP23.1■■□□□ 1.29
NIFK-201ENST00000285814 PLBD2Q8NHP8 589 aa23.1■■□□□ 1.29
NIFK-201ENST00000285814 IBTKQ9P2D0 1353 aaPredicted RBP23.1■■□□□ 1.29
NIFK-201ENST00000285814 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
NIFK-201ENST00000285814 IGHDP01880 384 aa23.08■■□□□ 1.29
NIFK-201ENST00000285814 ZBTB1Q9Y2K1 713 aa23.08■■□□□ 1.29
NIFK-201ENST00000285814 TTLL7Q6ZT98 887 aa23.08■■□□□ 1.28
NIFK-201ENST00000285814 LINS1Q8NG48 757 aa23.08■■□□□ 1.28
NIFK-201ENST00000285814 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.28
NIFK-201ENST00000285814 EP400Q96L91 3159 aa23.07■■□□□ 1.28
NIFK-201ENST00000285814 USP44Q9H0E7 712 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms