RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 CCDC82Q8N4S0 544 aa18.49■□□□□ 0.55
USP43-201ENST00000285199 F13A1P00488 732 aa18.49■□□□□ 0.55
USP43-201ENST00000285199 POLR3DP05423 398 aaPredicted RBP18.48■□□□□ 0.55
USP43-201ENST00000285199 RHPN1Q8TCX5 695 aa18.48■□□□□ 0.55
USP43-201ENST00000285199 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
USP43-201ENST00000285199 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
USP43-201ENST00000285199 PA2G4Q9UQ80 394 aaKnown RBP18.48■□□□□ 0.55
USP43-201ENST00000285199 SKILP12757 684 aa18.48■□□□□ 0.55
USP43-201ENST00000285199 CHMLP26374 656 aa18.48■□□□□ 0.55
USP43-201ENST00000285199 ANKRD1Q15327 319 aa18.48■□□□□ 0.55
USP43-201ENST00000285199 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
USP43-201ENST00000285199 TMC6Q7Z403 805 aa18.47■□□□□ 0.55
USP43-201ENST00000285199 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
USP43-201ENST00000285199 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
USP43-201ENST00000285199 UVSSAQ2YD98 709 aa18.46■□□□□ 0.55
USP43-201ENST00000285199 TMCO3Q6UWJ1 677 aa18.46■□□□□ 0.55
USP43-201ENST00000285199 FSIP1Q8NA03 581 aa18.46■□□□□ 0.55
USP43-201ENST00000285199 TYRO3Q06418 890 aa18.46■□□□□ 0.55
USP43-201ENST00000285199 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
USP43-201ENST00000285199 VGLL3A8MV65 326 aa18.45■□□□□ 0.54
USP43-201ENST00000285199 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
USP43-201ENST00000285199 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
USP43-201ENST00000285199 CPLX3Q8WVH0 158 aa18.45■□□□□ 0.54
USP43-201ENST00000285199 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
USP43-201ENST00000285199 FAM193AP78312 1265 aa18.45■□□□□ 0.54
USP43-201ENST00000285199 ERCC4Q92889 916 aaPredicted RBP18.45■□□□□ 0.54
USP43-201ENST00000285199 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
USP43-201ENST00000285199 IPO7O95373 1038 aaKnown RBP18.44■□□□□ 0.54
USP43-201ENST00000285199 LRMPQ12912 555 aa18.44■□□□□ 0.54
USP43-201ENST00000285199 ZNF692Q9BU19 519 aaPredicted RBP18.44■□□□□ 0.54
USP43-201ENST00000285199 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
USP43-201ENST00000285199 SH2B1Q9NRF2 756 aaPredicted RBP18.44■□□□□ 0.54
USP43-201ENST00000285199 HIP1O00291 1037 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 KLHL10Q6JEL2 608 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 BRF1Q92994 677 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 MYRIPQ8NFW9 859 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 KIF14Q15058 1648 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 CLSTN1O94985 981 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 SAFBQ15424 915 aaKnown RBP eCLIP18.43■□□□□ 0.54
USP43-201ENST00000285199 AXDND1Q5T1B0 1012 aaPredicted RBP18.43■□□□□ 0.54
USP43-201ENST00000285199 CCDC102AQ96A19 550 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 ECHDC1Q9NTX5 307 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
USP43-201ENST00000285199 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
USP43-201ENST00000285199 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 NAP1L1P55209 391 aaKnown RBP18.42■□□□□ 0.54
USP43-201ENST00000285199 HAND2P61296 217 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 CHST3Q7LGC8 479 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 RBM8AQ9Y5S9 174 aaKnown RBP18.42■□□□□ 0.54
USP43-201ENST00000285199 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 BCORL1Q5H9F3 1711 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 IBSPP21815 317 aaPredicted RBP18.42■□□□□ 0.54
USP43-201ENST00000285199 DNAAF4Q8WXU2 420 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 PTPRCP08575 1304 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 GTF3C6Q969F1 213 aa18.42■□□□□ 0.54
USP43-201ENST00000285199 LEKR1Q6ZMV7 388 aa18.41■□□□□ 0.54
USP43-201ENST00000285199 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
USP43-201ENST00000285199 SNW1Q13573 536 aaKnown RBP18.41■□□□□ 0.54
USP43-201ENST00000285199 DDX19AQ9NUU7 478 aaKnown RBP18.41■□□□□ 0.54
USP43-201ENST00000285199 ANO10Q9NW15 660 aa18.41■□□□□ 0.54
USP43-201ENST00000285199 RNF216Q9NWF9 866 aaPredicted RBP18.41■□□□□ 0.54
USP43-201ENST00000285199 DNAI1Q9UI46 699 aa18.41■□□□□ 0.54
USP43-201ENST00000285199 MSH6P52701 1360 aa18.4■□□□□ 0.54
USP43-201ENST00000285199 SMAP1Q8IYB5 467 aaPredicted RBP18.4■□□□□ 0.54
USP43-201ENST00000285199 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
USP43-201ENST00000285199 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
USP43-201ENST00000285199 SIRT2Q8IXJ6 389 aa18.4■□□□□ 0.54
USP43-201ENST00000285199 PHAXQ9H814 394 aaKnown RBP18.4■□□□□ 0.54
USP43-201ENST00000285199 SNRKQ9NRH2 765 aa18.4■□□□□ 0.54
USP43-201ENST00000285199 USP16Q9Y5T5 823 aa18.4■□□□□ 0.54
USP43-201ENST00000285199 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.54
USP43-201ENST00000285199 HOOK1Q9UJC3 728 aaKnown RBP18.39■□□□□ 0.54
USP43-201ENST00000285199 INSRP06213 1382 aa18.39■□□□□ 0.53
USP43-201ENST00000285199 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
USP43-201ENST00000285199 KRT222Q8N1A0 295 aa18.39■□□□□ 0.53
USP43-201ENST00000285199 AOPEPQ8N6M6 819 aa18.39■□□□□ 0.53
USP43-201ENST00000285199 EIF4A2Q14240 407 aaKnown RBP18.39■□□□□ 0.53
USP43-201ENST00000285199 DDX46Q7L014 1031 aaKnown RBP18.39■□□□□ 0.53
USP43-201ENST00000285199 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
USP43-201ENST00000285199 LMOD1P29536 600 aaPredicted RBP18.38■□□□□ 0.53
USP43-201ENST00000285199 NOL10Q9BSC4 688 aaKnown RBP18.38■□□□□ 0.53
USP43-201ENST00000285199 KDM5CP41229 1560 aa18.38■□□□□ 0.53
USP43-201ENST00000285199 ATP8B2P98198 1209 aa18.38■□□□□ 0.53
USP43-201ENST00000285199 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
USP43-201ENST00000285199 WDR62O43379 1518 aa18.38■□□□□ 0.53
USP43-201ENST00000285199 CWC15Q9P013 229 aaKnown RBP18.38■□□□□ 0.53
USP43-201ENST00000285199 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
USP43-201ENST00000285199 BRD1O95696 1058 aa18.38■□□□□ 0.53
USP43-201ENST00000285199 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
USP43-201ENST00000285199 H0YHG0 523 aa18.37■□□□□ 0.53
USP43-201ENST00000285199 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
USP43-201ENST00000285199 ANKRD20A12PQ8NF67 263 aa18.37■□□□□ 0.53
USP43-201ENST00000285199 NUP133Q8WUM0 1156 aa18.37■□□□□ 0.53
USP43-201ENST00000285199 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms