RNA–Protein interactions for RNA: ENST00000282999.7

SRP19-201, Transcript of signal recognition particle 19, humanhuman

TSL 1 (best) BASIC

Gene SRP19, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-201ENST00000282999 STARD3NLO95772 234 aa21.54■■□□□ 1.04
SRP19-201ENST00000282999 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
SRP19-201ENST00000282999 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
SRP19-201ENST00000282999 CHD4Q14839 1912 aa21.54■■□□□ 1.04
SRP19-201ENST00000282999 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
SRP19-201ENST00000282999 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
SRP19-201ENST00000282999 PNNQ9H307 717 aaKnown RBP21.53■■□□□ 1.04
SRP19-201ENST00000282999 PARP3Q9Y6F1 533 aa21.53■■□□□ 1.04
SRP19-201ENST00000282999 COL15A1P39059 1388 aa21.52■■□□□ 1.04
SRP19-201ENST00000282999 BTBD11A6QL63 1104 aa21.52■■□□□ 1.04
SRP19-201ENST00000282999 YBX3P16989 372 aaKnown RBP eCLIP21.52■■□□□ 1.04
SRP19-201ENST00000282999 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
SRP19-201ENST00000282999 ZBTB1Q9Y2K1 713 aa21.52■■□□□ 1.04
SRP19-201ENST00000282999 C10orf71Q711Q0 1435 aa21.52■■□□□ 1.04
SRP19-201ENST00000282999 KIF13BQ9NQT8 1826 aa21.51■■□□□ 1.03
SRP19-201ENST00000282999 ZPR1O75312 459 aa21.51■■□□□ 1.03
SRP19-201ENST00000282999 MCM10Q7L590 875 aa21.5■■□□□ 1.03
SRP19-201ENST00000282999 TGFB2P61812 414 aa21.49■■□□□ 1.03
SRP19-201ENST00000282999 FKBP8Q14318 412 aa21.48■■□□□ 1.03
SRP19-201ENST00000282999 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
SRP19-201ENST00000282999 NARFQ9UHQ1 456 aa21.48■■□□□ 1.03
SRP19-201ENST00000282999 MYBBP1AQ9BQG0 1328 aaKnown RBP21.48■■□□□ 1.03
SRP19-201ENST00000282999 PXDNLA1KZ92 1463 aa21.47■■□□□ 1.03
SRP19-201ENST00000282999 A0A087WZG4 1122 aa21.47■■□□□ 1.03
SRP19-201ENST00000282999 ZEB1P37275 1124 aaPredicted RBP21.47■■□□□ 1.03
SRP19-201ENST00000282999 USPL1Q5W0Q7 1092 aa21.47■■□□□ 1.03
SRP19-201ENST00000282999 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
SRP19-201ENST00000282999 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
SRP19-201ENST00000282999 EIF5P55010 431 aaKnown RBP21.45■■□□□ 1.02
SRP19-201ENST00000282999 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
SRP19-201ENST00000282999 NFE2L2Q16236 605 aa21.45■■□□□ 1.02
SRP19-201ENST00000282999 ZNF784Q8NCA9 323 aaPredicted RBP21.45■■□□□ 1.02
SRP19-201ENST00000282999 KIAA1551Q9HCM1 1747 aa21.45■■□□□ 1.02
SRP19-201ENST00000282999 KCNQ3O43525 872 aa21.44■■□□□ 1.02
SRP19-201ENST00000282999 TM4SF1P30408 202 aa21.44■■□□□ 1.02
SRP19-201ENST00000282999 DDR1Q08345 913 aa21.44■■□□□ 1.02
SRP19-201ENST00000282999 TAF7Q15545 349 aaPredicted RBP21.44■■□□□ 1.02
SRP19-201ENST00000282999 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
SRP19-201ENST00000282999 IL6STP40189 918 aaPredicted RBP21.43■■□□□ 1.02
SRP19-201ENST00000282999 SNRPA1P09661 255 aaKnown RBP21.42■■□□□ 1.02
SRP19-201ENST00000282999 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
SRP19-201ENST00000282999 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
SRP19-201ENST00000282999 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
SRP19-201ENST00000282999 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
SRP19-201ENST00000282999 NFIXQ14938 502 aa21.4■■□□□ 1.02
SRP19-201ENST00000282999 BCL2L12Q9HB09 334 aa21.4■■□□□ 1.02
SRP19-201ENST00000282999 N4BP2Q86UW6 1770 aaPredicted RBP21.4■■□□□ 1.02
SRP19-201ENST00000282999 A0A0G2JLW4 131 aa21.39■■□□□ 1.01
SRP19-201ENST00000282999 A1BGP04217 495 aa21.39■■□□□ 1.01
SRP19-201ENST00000282999 DPEP1P16444 411 aa21.38■■□□□ 1.01
SRP19-201ENST00000282999 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
SRP19-201ENST00000282999 WWC3Q9ULE0 1092 aa21.38■■□□□ 1.01
SRP19-201ENST00000282999 ZNF330Q9Y3S2 320 aaPredicted RBP21.38■■□□□ 1.01
SRP19-201ENST00000282999 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
SRP19-201ENST00000282999 NRXN2Q9P2S2 1712 aa21.38■■□□□ 1.01
SRP19-201ENST00000282999 UTRNP46939 3433 aa21.38■■□□□ 1.01
SRP19-201ENST00000282999 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
SRP19-201ENST00000282999 GOLGB1Q14789 3259 aaKnown RBP21.36■■□□□ 1.01
SRP19-201ENST00000282999 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
SRP19-201ENST00000282999 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
SRP19-201ENST00000282999 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
SRP19-201ENST00000282999 SERPINB2P05120 415 aa21.35■■□□□ 1.01
SRP19-201ENST00000282999 LMOD3Q0VAK6 560 aa21.35■■□□□ 1.01
SRP19-201ENST00000282999 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
SRP19-201ENST00000282999 TBC1D2BQ9UPU7 963 aa21.35■■□□□ 1.01
SRP19-201ENST00000282999 LAMB4A4D0S4 1761 aa21.35■■□□□ 1.01
SRP19-201ENST00000282999 BRCA1P38398 1863 aaKnown RBP21.35■■□□□ 1.01
SRP19-201ENST00000282999 KCNA3P22001 575 aa21.34■■□□□ 1.01
SRP19-201ENST00000282999 PIM2Q9P1W9 311 aa21.34■■□□□ 1.01
SRP19-201ENST00000282999 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
SRP19-201ENST00000282999 BCORQ6W2J9 1755 aa21.33■■□□□ 1.01
SRP19-201ENST00000282999 RIPK4P57078 832 aa21.33■■□□□ 1.01
SRP19-201ENST00000282999 DZIP3Q86Y13 1208 aaKnown RBP21.33■■□□□ 1.01
SRP19-201ENST00000282999 THUMPD2Q9BTF0 503 aaKnown RBP21.33■■□□□ 1.01
SRP19-201ENST00000282999 MIS18AQ9NYP9 233 aa21.33■■□□□ 1.01
SRP19-201ENST00000282999 CARMIL3Q8ND23 1372 aa21.33■■□□□ 1
SRP19-201ENST00000282999 CAMTA2O94983 1202 aa21.32■■□□□ 1
SRP19-201ENST00000282999 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
SRP19-201ENST00000282999 TBC1D9BQ66K14 1250 aa21.32■■□□□ 1
SRP19-201ENST00000282999 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
SRP19-201ENST00000282999 ADCY9O60503 1353 aa21.32■■□□□ 1
SRP19-201ENST00000282999 CAPN15O75808 1086 aa21.31■■□□□ 1
SRP19-201ENST00000282999 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
SRP19-201ENST00000282999 RGL2O15211 777 aa21.3■■□□□ 1
SRP19-201ENST00000282999 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
SRP19-201ENST00000282999 DALRD3Q5D0E6 543 aaKnown RBP21.3■■□□□ 1
SRP19-201ENST00000282999 RUNDC1Q96C34 613 aa21.3■■□□□ 1
SRP19-201ENST00000282999 BABAM1Q9NWV8 329 aa21.3■■□□□ 1
SRP19-201ENST00000282999 ZNF652Q9Y2D9 606 aa21.3■■□□□ 1
SRP19-201ENST00000282999 ATP10DQ9P241 1426 aa21.29■■□□□ 1
SRP19-201ENST00000282999 ARFGEF1Q9Y6D6 1849 aa21.29■■□□□ 1
SRP19-201ENST00000282999 CHRNA5P30532 468 aa21.29■■□□□ 1
SRP19-201ENST00000282999 PIP4K2AP48426 406 aaPredicted RBP21.29■■□□□ 1
SRP19-201ENST00000282999 CLEC4GQ6UXB4 293 aa21.29■■□□□ 1
SRP19-201ENST00000282999 SETDB2Q96T68 719 aa21.29■■□□□ 1
SRP19-201ENST00000282999 NBPF26B4DH59 902 aa21.28■■□□□ 1
SRP19-201ENST00000282999 NBPF10Q6P3W6 841 aaKnown RBP21.28■■□□□ 1
SRP19-201ENST00000282999 NBPF15Q8N660 670 aa21.28■■□□□ 1
SRP19-201ENST00000282999 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
SRP19-201ENST00000282999 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms