RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
CAPN1-201ENST00000279247 HOXB7P09629 217 aa22.2■■□□□ 1.14
CAPN1-201ENST00000279247 CABP4P57796 275 aa22.2■■□□□ 1.14
CAPN1-201ENST00000279247 BEND3Q5T5X7 828 aa22.2■■□□□ 1.14
CAPN1-201ENST00000279247 BTG4Q9NY30 223 aa22.2■■□□□ 1.14
CAPN1-201ENST00000279247 CDC45O75419 566 aa22.2■■□□□ 1.14
CAPN1-201ENST00000279247 KAT6BQ8WYB5 2073 aa22.2■■□□□ 1.14
CAPN1-201ENST00000279247 ADCY9O60503 1353 aa22.19■■□□□ 1.14
CAPN1-201ENST00000279247 LRRCC1Q9C099 1032 aa22.19■■□□□ 1.14
CAPN1-201ENST00000279247 ROBO1Q9Y6N7 1651 aa22.19■■□□□ 1.14
CAPN1-201ENST00000279247 SDSP20132 328 aa22.19■■□□□ 1.14
CAPN1-201ENST00000279247 USP16Q9Y5T5 823 aa22.19■■□□□ 1.14
CAPN1-201ENST00000279247 CAMTA1Q9Y6Y1 1673 aa22.18■■□□□ 1.14
CAPN1-201ENST00000279247 KDM3BQ7LBC6 1761 aa22.18■■□□□ 1.14
CAPN1-201ENST00000279247 CACNA1FO60840 1977 aa22.18■■□□□ 1.14
CAPN1-201ENST00000279247 JARID2Q92833 1246 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-201ENST00000279247 NFKBIBQ15653 356 aa22.17■■□□□ 1.14
CAPN1-201ENST00000279247 RIC3Q7Z5B4 369 aa22.17■■□□□ 1.14
CAPN1-201ENST00000279247 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CAPN1-201ENST00000279247 DCAF5Q96JK2 942 aa22.16■■□□□ 1.14
CAPN1-201ENST00000279247 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
CAPN1-201ENST00000279247 PDE1AP54750 535 aa22.15■■□□□ 1.14
CAPN1-201ENST00000279247 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
CAPN1-201ENST00000279247 MYT1Q01538 1121 aa22.15■■□□□ 1.14
CAPN1-201ENST00000279247 OS9Q13438 667 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-201ENST00000279247 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
CAPN1-201ENST00000279247 KSR2Q6VAB6 950 aa22.15■■□□□ 1.14
CAPN1-201ENST00000279247 RILPL2Q969X0 211 aa22.15■■□□□ 1.14
CAPN1-201ENST00000279247 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
CAPN1-201ENST00000279247 COPS6Q7L5N1 327 aa22.14■■□□□ 1.13
CAPN1-201ENST00000279247 WDR17Q8IZU2 1322 aa22.14■■□□□ 1.13
CAPN1-201ENST00000279247 ZCRB1Q8TBF4 217 aaKnown RBP22.14■■□□□ 1.13
CAPN1-201ENST00000279247 XAGE3Q8WTP9 111 aa22.14■■□□□ 1.13
CAPN1-201ENST00000279247 COL18A1P39060 1754 aa22.14■■□□□ 1.13
CAPN1-201ENST00000279247 CPDO75976 1380 aa22.14■■□□□ 1.13
CAPN1-201ENST00000279247 DDX21Q9NR30 783 aaKnown RBP eCLIP22.14■■□□□ 1.13
CAPN1-201ENST00000279247 MAP4K4O95819 1239 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-201ENST00000279247 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
CAPN1-201ENST00000279247 TOM1O60784 492 aa22.13■■□□□ 1.13
CAPN1-201ENST00000279247 FRAT2O75474 233 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-201ENST00000279247 FOXD4L1Q9NU39 408 aa22.13■■□□□ 1.13
CAPN1-201ENST00000279247 PDIA6Q15084 440 aa22.12■■□□□ 1.13
CAPN1-201ENST00000279247 MX1P20591 662 aa22.12■■□□□ 1.13
CAPN1-201ENST00000279247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.12■■□□□ 1.132e-6■■□□□ 11.9
CAPN1-201ENST00000279247 PA2G4Q9UQ80 394 aaKnown RBP22.12■■□□□ 1.13
CAPN1-201ENST00000279247 ZNF330Q9Y3S2 320 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-201ENST00000279247 HSCBQ8IWL3 235 aa22.11■■□□□ 1.13
CAPN1-201ENST00000279247 DDX58O95786 925 aaKnown RBP22.11■■□□□ 1.13
CAPN1-201ENST00000279247 CRYBG1Q9Y4K1 1723 aa22.11■■□□□ 1.13
CAPN1-201ENST00000279247 MYD88Q99836 296 aa22.1■■□□□ 1.13
CAPN1-201ENST00000279247 NHSL1Q5SYE7 1610 aa22.09■■□□□ 1.13
CAPN1-201ENST00000279247 SNRPA1P09661 255 aaKnown RBP22.09■■□□□ 1.13
CAPN1-201ENST00000279247 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
CAPN1-201ENST00000279247 IL2RBP14784 551 aa22.09■■□□□ 1.13
CAPN1-201ENST00000279247 DEKP35659 375 aaKnown RBP22.09■■□□□ 1.13
CAPN1-201ENST00000279247 SSH3Q8TE77 659 aa22.09■■□□□ 1.13
CAPN1-201ENST00000279247 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
CAPN1-201ENST00000279247 HEG1Q9ULI3 1381 aa22.09■■□□□ 1.13
CAPN1-201ENST00000279247 A0A0G2JS52 829 aa22.09■■□□□ 1.13
CAPN1-201ENST00000279247 ATP5J2-PTCD1G3V325 749 aa22.08■■□□□ 1.13
CAPN1-201ENST00000279247 COL5A2P05997 1499 aaPredicted RBP22.08■■□□□ 1.13
CAPN1-201ENST00000279247 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.12
CAPN1-201ENST00000279247 RBM25P49756 843 aaKnown RBP22.08■■□□□ 1.12
CAPN1-201ENST00000279247 CASC1Q6TDU7 716 aa22.08■■□□□ 1.12
CAPN1-201ENST00000279247 SIL1Q9H173 461 aa22.07■■□□□ 1.12
CAPN1-201ENST00000279247 RHPN1Q8TCX5 695 aa22.07■■□□□ 1.12
CAPN1-201ENST00000279247 PXDNLA1KZ92 1463 aa22.07■■□□□ 1.12
CAPN1-201ENST00000279247 OVOS2A0A0G2JMS6 1433 aa22.07■■□□□ 1.12
CAPN1-201ENST00000279247 CD2BP2O95400 341 aaKnown RBP22.06■■□□□ 1.12
CAPN1-201ENST00000279247 ARXQ96QS3 562 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 SUCLG2Q96I99 432 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 NEXNQ0ZGT2 675 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 UNC5CLQ8IV45 518 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 KLHDC4Q8TBB5 520 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
CAPN1-201ENST00000279247 IGKV5-2P06315 115 aa22.05■■□□□ 1.12
CAPN1-201ENST00000279247 LINS1Q8NG48 757 aa22.05■■□□□ 1.12
CAPN1-201ENST00000279247 GRM8O00222 908 aa22.05■■□□□ 1.12
CAPN1-201ENST00000279247 KIF2CQ99661 725 aa22.05■■□□□ 1.12
CAPN1-201ENST00000279247 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
CAPN1-201ENST00000279247 HSP90AA1P07900 732 aaKnown RBP22.04■■□□□ 1.12
CAPN1-201ENST00000279247 ANKRD13DQ6ZTN6 518 aa22.04■■□□□ 1.12
CAPN1-201ENST00000279247 BICC1Q9H694 974 aaKnown RBP22.04■■□□□ 1.12
CAPN1-201ENST00000279247 A1BGP04217 495 aa22.03■■□□□ 1.12
CAPN1-201ENST00000279247 POLA2Q14181 598 aa22.03■■□□□ 1.12
CAPN1-201ENST00000279247 ALDH1L1O75891 902 aa22.03■■□□□ 1.12
CAPN1-201ENST00000279247 CARD10Q9BWT7 1032 aa22.03■■□□□ 1.12
CAPN1-201ENST00000279247 CCDC9Q9Y3X0 531 aaKnown RBP22.02■■□□□ 1.12
CAPN1-201ENST00000279247 SIPA1L3O60292 1781 aaPredicted RBP22.02■■□□□ 1.12
CAPN1-201ENST00000279247 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
CAPN1-201ENST00000279247 KIF1BPQ96EK5 621 aa22.01■■□□□ 1.11
CAPN1-201ENST00000279247 C5P01031 1676 aa22.01■■□□□ 1.11
CAPN1-201ENST00000279247 USP26Q9BXU7 913 aa22■■□□□ 1.11
CAPN1-201ENST00000279247 ABCA3Q99758 1704 aa22■■□□□ 1.11
CAPN1-201ENST00000279247 NEURL1BA8MQ27 555 aa22■■□□□ 1.11
CAPN1-201ENST00000279247 UBE3BQ7Z3V4 1068 aa22■■□□□ 1.11
CAPN1-201ENST00000279247 KAZALD1Q96I82 304 aa22■■□□□ 1.11
CAPN1-201ENST00000279247 OSBPL3Q9H4L5 887 aa22■■□□□ 1.11
CAPN1-201ENST00000279247 SALL3Q9BXA9 1300 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms