RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 HSPA2P54652 639 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 PTPRUQ92729 1446 aa14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 EVA1CP58658 441 aa14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 PROSER3Q2NL68 480 aa14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 SYTL4Q96C24 671 aaPredicted RBP14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 ARHGEF10O15013 1369 aa14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 KIAA0232Q92628 1395 aa14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 HSP90AB4PQ58FF6 505 aa14.36□□□□□ -0.11
SLC13A3-201ENST00000279027 HSP90B1P14625 803 aaKnown RBP14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 TMX3Q96JJ7 454 aa14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 NASPP49321 788 aaPredicted RBP14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 PALD1Q9ULE6 856 aa14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 CABP4P57796 275 aa14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 EIF4A1P60842 406 aaKnown RBP14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 PRPF40BQ6NWY9 871 aaKnown RBP14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 TOM1L2Q6ZVM7 507 aa14.35□□□□□ -0.11
SLC13A3-201ENST00000279027 STK3Q13188 491 aa14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 CHMLP26374 656 aa14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 PTMSP20962 102 aa14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 AKAP4Q5JQC9 854 aa14.34□□□□□ -0.11
SLC13A3-201ENST00000279027 FIBPO43427 364 aa14.33□□□□□ -0.11
SLC13A3-201ENST00000279027 AMOTQ4VCS5 1084 aa14.33□□□□□ -0.11
SLC13A3-201ENST00000279027 RUFY2Q8WXA3 655 aa14.33□□□□□ -0.11
SLC13A3-201ENST00000279027 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.11
SLC13A3-201ENST00000279027 KIF2CQ99661 725 aa14.33□□□□□ -0.11
SLC13A3-201ENST00000279027 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 MSNP26038 577 aaKnown RBP14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 COPS6Q7L5N1 327 aa14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 PRDM11Q9NQV5 511 aa14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 GOLGA6L4A6NEF3 574 aa14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 ZKSCAN1P17029 563 aaPredicted RBP14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
SLC13A3-201ENST00000279027 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
SLC13A3-201ENST00000279027 XAGE3Q8WTP9 111 aa14.32□□□□□ -0.12
SLC13A3-201ENST00000279027 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
SLC13A3-201ENST00000279027 NDUFB9Q9Y6M9 179 aa14.32□□□□□ -0.12
SLC13A3-201ENST00000279027 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
SLC13A3-201ENST00000279027 SYCE3A1L190 88 aa14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 UBE3BQ7Z3V4 1068 aa14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 FAM177BA6PVY3 158 aa14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 AXIN2Q9Y2T1 843 aa14.31□□□□□ -0.12
SLC13A3-201ENST00000279027 FERMT3Q86UX7 667 aa14.3□□□□□ -0.12
SLC13A3-201ENST00000279027 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
SLC13A3-201ENST00000279027 ARID3AQ99856 593 aa14.3□□□□□ -0.12
SLC13A3-201ENST00000279027 CWC22Q9HCG8 908 aaKnown RBP14.3□□□□□ -0.12
SLC13A3-201ENST00000279027 CDC42BPGQ6DT37 1551 aa14.3□□□□□ -0.12
SLC13A3-201ENST00000279027 DLC1Q96QB1 1528 aa14.3□□□□□ -0.12
SLC13A3-201ENST00000279027 SPATA31D1Q6ZQQ2 1576 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 ZBTB3Q9H5J0 574 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 USP32Q8NFA0 1604 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 AGLP35573 1532 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 OVOS2A0A0J9YW53 1432 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 OVOS2Q6IE36 1432 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 CRB1P82279 1406 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 KSR2Q6VAB6 950 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 GAS2L3Q86XJ1 694 aa14.29□□□□□ -0.12
SLC13A3-201ENST00000279027 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
SLC13A3-201ENST00000279027 A0A087WZG4 1122 aa14.28□□□□□ -0.12
SLC13A3-201ENST00000279027 KDM4AO75164 1064 aa14.28□□□□□ -0.12
SLC13A3-201ENST00000279027 NECAB1Q8N987 351 aa14.28□□□□□ -0.12
SLC13A3-201ENST00000279027 ECHDC1Q9NTX5 307 aa14.28□□□□□ -0.12
SLC13A3-201ENST00000279027 EDC3Q96F86 508 aaKnown RBP14.27□□□□□ -0.12
SLC13A3-201ENST00000279027 GRM8O00222 908 aa14.27□□□□□ -0.12
SLC13A3-201ENST00000279027 HYPKQ9NX55 129 aa14.27□□□□□ -0.12
SLC13A3-201ENST00000279027 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.13
SLC13A3-201ENST00000279027 PDRG1Q9NUG6 133 aa14.27□□□□□ -0.13
SLC13A3-201ENST00000279027 LARP1Q6PKG0 1096 aaKnown RBP14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 SUCLG2Q96I99 432 aa14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 BEND3Q5T5X7 828 aa14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 RRAGDQ9NQL2 400 aaPredicted RBP14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 MCM2P49736 904 aa14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
SLC13A3-201ENST00000279027 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 ERC1Q8IUD2 1116 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 USP31Q70CQ4 1352 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 CEBPZQ03701 1054 aaKnown RBP14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 SYAP1Q96A49 352 aaPredicted RBP14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 KIF20BQ96Q89 1820 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 ZNF790Q6PG37 636 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 SSH3Q8TE77 659 aa14.25□□□□□ -0.13
SLC13A3-201ENST00000279027 CEP170BQ9Y4F5 1589 aaPredicted RBP14.24□□□□□ -0.13
SLC13A3-201ENST00000279027 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms