RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 NCOA1Q15788 1441 aa16.71■□□□□ 0.26
PRDM15-201ENST00000269844 ZEB2O60315 1214 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 HSF2BPO75031 334 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 SMC1AQ14683 1233 aaKnown RBP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 TERF2Q15554 542 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 AFAP1L1Q8TED9 768 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 CCDC113Q9H0I3 377 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 LUC7LQ9NQ29 371 aaKnown RBP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 RALYLQ86SE5 291 aaKnown RBP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 RBBP5Q15291 538 aaKnown RBP16.7■□□□□ 0.26
PRDM15-201ENST00000269844 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
PRDM15-201ENST00000269844 ZSCAN22P10073 491 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-201ENST00000269844 PEX19P40855 299 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 IMMTQ16891 758 aaKnown RBP16.69■□□□□ 0.26
PRDM15-201ENST00000269844 B4GALNT4Q76KP1 1039 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 MAATS1Q7Z4T9 603 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 CPLX3Q8WVH0 158 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 WDR66Q8TBY9 1149 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 CEP83Q9Y592 693 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 MAP4K4O95819 1239 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-201ENST00000269844 IFFO1Q0D2I5 559 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-201ENST00000269844 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
PRDM15-201ENST00000269844 OPA1O60313 960 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
PRDM15-201ENST00000269844 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
PRDM15-201ENST00000269844 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
PRDM15-201ENST00000269844 GNAI3P08754 354 aa16.68■□□□□ 0.26
PRDM15-201ENST00000269844 ZNF215Q9UL58 517 aaPredicted RBP16.68■□□□□ 0.26
PRDM15-201ENST00000269844 LRRC9Q6ZRR7 1453 aa16.68■□□□□ 0.26
PRDM15-201ENST00000269844 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
PRDM15-201ENST00000269844 BIN1O00499 593 aa16.68■□□□□ 0.26
PRDM15-201ENST00000269844 PAFAH1B1P43034 410 aa16.68■□□□□ 0.26
PRDM15-201ENST00000269844 SUDS3Q9H7L9 328 aaPredicted RBP16.68■□□□□ 0.26
PRDM15-201ENST00000269844 VEZTQ9HBM0 779 aa16.68■□□□□ 0.26
PRDM15-201ENST00000269844 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
PRDM15-201ENST00000269844 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 SH2B1Q9NRF2 756 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-201ENST00000269844 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 NDUFAB1O14561 156 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 RHOXF2BP0C7M4 288 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 RHOXF2Q9BQY4 288 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 KDM2BQ8NHM5 1336 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 SEPT7Q16181 437 aaKnown RBP16.67■□□□□ 0.26
PRDM15-201ENST00000269844 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-201ENST00000269844 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
PRDM15-201ENST00000269844 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 LMBRD1Q9NUN5 540 aa16.67■□□□□ 0.26
PRDM15-201ENST00000269844 PUF60Q9UHX1 559 aaKnown RBP16.67■□□□□ 0.26
PRDM15-201ENST00000269844 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 HIP1O00291 1037 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 GJB2P29033 226 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 SYT1P21579 422 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
PRDM15-201ENST00000269844 RAD21O60216 631 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 LIG3P49916 1009 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 FSIP1Q8NA03 581 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 CARD6Q9BX69 1037 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
PRDM15-201ENST00000269844 MYO1CO00159 1063 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
PRDM15-201ENST00000269844 GNAI2P04899 355 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 ZSCAN20P17040 1043 aaPredicted RBP16.65■□□□□ 0.26
PRDM15-201ENST00000269844 PSME1Q06323 249 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 TUBB4BP68371 445 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 ISM2Q6H9L7 571 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
PRDM15-201ENST00000269844 MICAL1Q8TDZ2 1067 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 TMEM63CQ9P1W3 806 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRDM15-201ENST00000269844 ERCC6LQ2NKX8 1250 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 TAF4BQ92750 862 aa16.65■□□□□ 0.26
PRDM15-201ENST00000269844 TUBBP07437 444 aa16.64■□□□□ 0.26
PRDM15-201ENST00000269844 TXLNAP40222 546 aa16.64■□□□□ 0.26
PRDM15-201ENST00000269844 EPS15P42566 896 aa16.64■□□□□ 0.26
PRDM15-201ENST00000269844 CCDC50Q8IVM0 306 aa16.64■□□□□ 0.26
PRDM15-201ENST00000269844 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.26
PRDM15-201ENST00000269844 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
PRDM15-201ENST00000269844 BUB1BO60566 1050 aaPredicted RBP16.64■□□□□ 0.25
PRDM15-201ENST00000269844 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
PRDM15-201ENST00000269844 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
PRDM15-201ENST00000269844 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
PRDM15-201ENST00000269844 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 SLC3A2P08195 630 aaKnown RBP16.63■□□□□ 0.25
PRDM15-201ENST00000269844 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-201ENST00000269844 SWAP70Q9UH65 585 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-201ENST00000269844 ARHGAP25P42331 645 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 MATR3P43243 847 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms