RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 GIMAP6Q6P9H5 292 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 DUSP27Q5VZP5 1158 aa19.49■□□□□ 0.71
TSPAN3-201ENST00000267970 MYO1BO43795 1136 aa19.49■□□□□ 0.71
TSPAN3-201ENST00000267970 MKNK2Q9HBH9 465 aa19.49■□□□□ 0.71
TSPAN3-201ENST00000267970 CEP131Q9UPN4 1083 aa19.49■□□□□ 0.71
TSPAN3-201ENST00000267970 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-201ENST00000267970 SLFN5Q08AF3 891 aa19.48■□□□□ 0.71
TSPAN3-201ENST00000267970 LARP1Q6PKG0 1096 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-201ENST00000267970 SEC63Q9UGP8 760 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-201ENST00000267970 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-201ENST00000267970 NOP2P46087 812 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-201ENST00000267970 SMARCC1Q92922 1105 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-201ENST00000267970 KRT32Q14532 448 aa19.47■□□□□ 0.71
TSPAN3-201ENST00000267970 IFIT1P09914 478 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-201ENST00000267970 JADE2Q9NQC1 790 aa19.47■□□□□ 0.71
TSPAN3-201ENST00000267970 GOLGA8BA8MQT2 603 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 PIP4K2BP78356 416 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 TCERG1LQ5VWI1 586 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 WASF1Q92558 559 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 CEP135Q66GS9 1140 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 PAIP2Q9BPZ3 127 aaKnown RBP19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 TSG101Q99816 390 aa19.46■□□□□ 0.71
TSPAN3-201ENST00000267970 MTIF2P46199 727 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 MAP9Q49MG5 647 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 GBP3Q9H0R5 595 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 SNRKQ9NRH2 765 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 IGHMBP2P38935 993 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 LRRC2Q9BYS8 371 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 CALCOCO1Q9P1Z2 691 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 ARHGAP5Q13017 1502 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 NAPBQ9H115 298 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 NLRP5P59047 1200 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 NECAB1Q8N987 351 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 PPARDQ03181 441 aa19.45■□□□□ 0.7
TSPAN3-201ENST00000267970 SMC1AQ14683 1233 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 SLC12A7Q9Y666 1083 aa19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 CCDC12Q8WUD4 166 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 CTNNA2P26232 953 aa19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 PUF60Q9UHX1 559 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 MNAT1P51948 309 aa19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-201ENST00000267970 WDR78Q5VTH9 848 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 SSRP1Q08945 709 aaKnown RBP19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 CRACR2BQ8N4Y2 399 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 TCEANC2Q96MN5 208 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 ERBINQ96RT1 1412 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 GOLGA8AA7E2F4 631 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 PAFAH1B1P43034 410 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 GTF2A1P52655 376 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 ZSCAN23Q3MJ62 389 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 RGS22Q8NE09 1264 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 KIF1BPQ96EK5 621 aa19.43■□□□□ 0.7
TSPAN3-201ENST00000267970 IDEP14735 1019 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 PLCD3Q8N3E9 789 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 BBXQ8WY36 941 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 GNAT3A8MTJ3 354 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 IFIT3O14879 490 aaKnown RBP19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 PPP1R12BO60237 982 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 CCDC175P0C221 793 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 GNG11P61952 73 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 POTEJP0CG39 1038 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 ANKIB1Q9P2G1 1089 aa19.42■□□□□ 0.7
TSPAN3-201ENST00000267970 YEATS4O95619 227 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 ZNF213O14771 459 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 DESP17661 470 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 PTGS1P23219 599 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 GPTP24298 496 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 RSPH14Q9UHP6 348 aa19.41■□□□□ 0.7
TSPAN3-201ENST00000267970 NSD3Q9BZ95 1437 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 TBC1D9Q6ZT07 1266 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 RPAP2Q8IXW5 612 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 AFMP43652 599 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 COMMD10Q9Y6G5 202 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 NCOA2Q15596 1464 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 USO1O60763 962 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 IGHDP01880 384 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 RARSP54136 660 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 GCOM1H8Y6P7 765 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 MYZAPP0CAP1 466 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 MICU3Q86XE3 530 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 CNPY2Q9Y2B0 182 aa19.4■□□□□ 0.7
TSPAN3-201ENST00000267970 PRC1O43663 620 aa19.39■□□□□ 0.7
TSPAN3-201ENST00000267970 MCM6Q14566 821 aa19.39■□□□□ 0.7
TSPAN3-201ENST00000267970 GOLIM4O00461 696 aa19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 CCDC40Q4G0X9 1142 aa19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 APBB1IPQ7Z5R6 666 aaPredicted RBP19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 HOOK3Q86VS8 718 aa19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 SCAND2PQ9GZW5 306 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms