RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 NEMFO60524 1076 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 KIF5BP33176 963 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 TTC36A6NLP5 189 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 GSDMDP57764 484 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 CAPN2P17655 700 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 VPS18Q9P253 973 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
CHFR-201ENST00000266880 CEP120Q8N960 986 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 WASF1Q92558 559 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 MTIF2P46199 727 aaKnown RBP12.87□□□□□ -0.35
CHFR-201ENST00000266880 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHFR-201ENST00000266880 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
CHFR-201ENST00000266880 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
CHFR-201ENST00000266880 CCDC94Q9BW85 323 aaPredicted RBP12.86□□□□□ -0.35
CHFR-201ENST00000266880 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 C11orf95C9JLR9 678 aaPredicted RBP12.86□□□□□ -0.35
CHFR-201ENST00000266880 TRIM21P19474 475 aaKnown RBP12.86□□□□□ -0.35
CHFR-201ENST00000266880 TEX2Q8IWB9 1127 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 FLIIQ13045 1269 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 PRIMPOLQ96LW4 560 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
CHFR-201ENST00000266880 PSME1Q06323 249 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 PAXBP1Q9Y5B6 917 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 RAB3IL1Q8TBN0 382 aa12.86□□□□□ -0.35
CHFR-201ENST00000266880 FGFR1OPO95684 399 aaKnown RBP12.86□□□□□ -0.35
CHFR-201ENST00000266880 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
CHFR-201ENST00000266880 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
CHFR-201ENST00000266880 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 MYO1BO43795 1136 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 MCM5P33992 734 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
CHFR-201ENST00000266880 TNPO1Q92973 898 aaKnown RBP12.85□□□□□ -0.35
CHFR-201ENST00000266880 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
CHFR-201ENST00000266880 TERF1P54274 439 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 SMIM23A6NLE4 172 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 FERMT2Q96AC1 680 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
CHFR-201ENST00000266880 SMC6Q96SB8 1091 aa12.85□□□□□ -0.35
CHFR-201ENST00000266880 ARL1P40616 181 aaPredicted RBP12.84□□□□□ -0.35
CHFR-201ENST00000266880 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
CHFR-201ENST00000266880 ZEB2O60315 1214 aa12.84□□□□□ -0.35
CHFR-201ENST00000266880 EBAG9O00559 213 aa12.84□□□□□ -0.35
CHFR-201ENST00000266880 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
CHFR-201ENST00000266880 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
CHFR-201ENST00000266880 SH3BGRP55822 239 aaPredicted RBP12.83□□□□□ -0.35
CHFR-201ENST00000266880 CKAP4Q07065 602 aaKnown RBP12.83□□□□□ -0.35
CHFR-201ENST00000266880 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.35
CHFR-201ENST00000266880 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.35
CHFR-201ENST00000266880 KIF20AO95235 890 aa12.83□□□□□ -0.36
CHFR-201ENST00000266880 IQCGQ9H095 443 aaKnown RBP12.83□□□□□ -0.36
CHFR-201ENST00000266880 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
CHFR-201ENST00000266880 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
CHFR-201ENST00000266880 A0A1B0GUL7 405 aa12.83□□□□□ -0.36
CHFR-201ENST00000266880 NLRP2Q9NX02 1062 aa12.83□□□□□ -0.36
CHFR-201ENST00000266880 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
CHFR-201ENST00000266880 ERCC3P19447 782 aa12.83□□□□□ -0.36
CHFR-201ENST00000266880 OPA1O60313 960 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
CHFR-201ENST00000266880 CIB2O75838 187 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
CHFR-201ENST00000266880 GDPD2Q9HCC8 539 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 RASAL2Q9UJF2 1139 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 PCK1P35558 622 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 KRT32Q14532 448 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 ISM2Q6H9L7 571 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 GOLGA6L9A6NEM1 432 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 CTAGE5O15320 804 aa12.82□□□□□ -0.36
CHFR-201ENST00000266880 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
CHFR-201ENST00000266880 PRPF40BQ6NWY9 871 aaKnown RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 AP1ARQ63HQ0 302 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 SCAND2PQ9GZW5 306 aaPredicted RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 PABPN1LA6NDY0 278 aaKnown RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 CCT4P50991 539 aaKnown RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 MAP7D1Q3KQU3 841 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 DNAI2Q9GZS0 605 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 TACC1O75410 805 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
CHFR-201ENST00000266880 SEC62Q99442 399 aaKnown RBP12.81□□□□□ -0.36
CHFR-201ENST00000266880 PHACTR2O75167 634 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 KRBA2Q6ZNG9 492 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 SECISBP2LQ93073 1101 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms