RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LUZP1Q86V48 1076 aa14.02□□□□□ -0.16
SMG6-201ENST00000263073 CNNM3Q8NE01 707 aa14.02□□□□□ -0.16
SMG6-201ENST00000263073 TBC1D32Q96NH3 1257 aa14.02□□□□□ -0.16
SMG6-201ENST00000263073 TTC12Q9H892 705 aaPredicted RBP14.02□□□□□ -0.16
SMG6-201ENST00000263073 LIMCH1Q9UPQ0 1083 aa14.02□□□□□ -0.16
SMG6-201ENST00000263073 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
SMG6-201ENST00000263073 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.16
SMG6-201ENST00000263073 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
SMG6-201ENST00000263073 SCAND2PQ9GZW5 306 aaPredicted RBP14.02□□□□□ -0.17
SMG6-201ENST00000263073 TCEANC2Q96MN5 208 aa14.02□□□□□ -0.17
SMG6-201ENST00000263073 MYD88Q99836 296 aa14.02□□□□□ -0.17
SMG6-201ENST00000263073 CTR9Q6PD62 1173 aa14.02□□□□□ -0.17
SMG6-201ENST00000263073 JARID2Q92833 1246 aaPredicted RBP14.02□□□□□ -0.17
SMG6-201ENST00000263073 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.17
SMG6-201ENST00000263073 CACNA2D4Q7Z3S7 1137 aa14.01□□□□□ -0.17
SMG6-201ENST00000263073 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
SMG6-201ENST00000263073 FCHSD2O94868 740 aa14.01□□□□□ -0.17
SMG6-201ENST00000263073 ZNF165P49910 485 aa14.01□□□□□ -0.17
SMG6-201ENST00000263073 TAF7Q15545 349 aaPredicted RBP14.01□□□□□ -0.17
SMG6-201ENST00000263073 TRMT1LQ7Z2T5 733 aaKnown RBP14.01□□□□□ -0.17
SMG6-201ENST00000263073 SMARCC1Q92922 1105 aaPredicted RBP14.01□□□□□ -0.17
SMG6-201ENST00000263073 DYNC1I1O14576 645 aa14□□□□□ -0.17
SMG6-201ENST00000263073 GBP3Q9H0R5 595 aa14□□□□□ -0.17
SMG6-201ENST00000263073 C9orf84Q5VXU9 1444 aa14□□□□□ -0.17
SMG6-201ENST00000263073 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
SMG6-201ENST00000263073 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
SMG6-201ENST00000263073 ZNF76P36508 570 aa14□□□□□ -0.17
SMG6-201ENST00000263073 HAND2P61296 217 aa14□□□□□ -0.17
SMG6-201ENST00000263073 TDRD12Q587J7 1177 aaKnown RBP14□□□□□ -0.17
SMG6-201ENST00000263073 ZSCAN25Q6NSZ9 544 aa14□□□□□ -0.17
SMG6-201ENST00000263073 TOM1L2Q6ZVM7 507 aa14□□□□□ -0.17
SMG6-201ENST00000263073 LRRC2Q9BYS8 371 aa14□□□□□ -0.17
SMG6-201ENST00000263073 NOLC1Q14978 699 aaKnown RBP eCLIP14□□□□□ -0.17
SMG6-201ENST00000263073 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
SMG6-201ENST00000263073 CTNNBL1Q8WYA6 563 aaPredicted RBP14□□□□□ -0.17
SMG6-201ENST00000263073 MACROD2A1Z1Q3 448 aa14□□□□□ -0.17
SMG6-201ENST00000263073 KIF2AO00139 706 aaPredicted RBP14□□□□□ -0.17
SMG6-201ENST00000263073 GLRX3O76003 335 aaKnown RBP14□□□□□ -0.17
SMG6-201ENST00000263073 HLTFQ14527 1009 aaKnown RBP eCLIP14□□□□□ -0.176e-12■□□□□ 8.9
SMG6-201ENST00000263073 BMP2KQ9NSY1 1161 aaPredicted RBP14□□□□□ -0.17
SMG6-201ENST00000263073 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14□□□□□ -0.17
SMG6-201ENST00000263073 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 GNG11P61952 73 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 ZSCAN29Q8IWY8 852 aaPredicted RBP13.99□□□□□ -0.17
SMG6-201ENST00000263073 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 MPHOSPH10O00566 681 aaKnown RBP13.99□□□□□ -0.17
SMG6-201ENST00000263073 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 TXLNBQ8N3L3 684 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 FAM83GA6ND36 823 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 ANO6Q4KMQ2 910 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 TNNQ9UQP3 1299 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 RTEL1-TNFRSF6BF6WH68 1400 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 PRIM1P49642 420 aaKnown RBP13.99□□□□□ -0.17
SMG6-201ENST00000263073 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
SMG6-201ENST00000263073 FBLN1P23142 703 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 STX1AQ16623 288 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 KLHL40Q2TBA0 621 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 MAP9Q49MG5 647 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 MAATS1Q7Z4T9 603 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 WAPLQ7Z5K2 1190 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 CEP131Q9UPN4 1083 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 PRG4Q92954 1404 aaPredicted RBP13.98□□□□□ -0.17
SMG6-201ENST00000263073 CCDC186Q7Z3E2 898 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
SMG6-201ENST00000263073 IFIT1P09914 478 aaKnown RBP13.98□□□□□ -0.17
SMG6-201ENST00000263073 PTCD1O75127 700 aaKnown RBP13.98□□□□□ -0.17
SMG6-201ENST00000263073 CLCN1P35523 988 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 SPTY2D1Q68D10 685 aaPredicted RBP13.98□□□□□ -0.17
SMG6-201ENST00000263073 KRI1Q8N9T8 703 aaKnown RBP13.98□□□□□ -0.17
SMG6-201ENST00000263073 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 INCENPQ9NQS7 918 aa13.98□□□□□ -0.17
SMG6-201ENST00000263073 RSPH14Q9UHP6 348 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 WASF1Q92558 559 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 PRPF4BQ13523 1007 aaKnown RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 DRC1Q96MC2 740 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 HFM1A2PYH4 1435 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 ZC3H6P61129 1189 aaKnown RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 MCM6Q14566 821 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 C16orf71Q8IYS4 520 aaPredicted RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 SH2B1Q9NRF2 756 aaPredicted RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 RANBP6O60518 1105 aaKnown RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
SMG6-201ENST00000263073 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
SMG6-201ENST00000263073 GSTTP1A0A1W2PQM5 241 aa13.96□□□□□ -0.17
SMG6-201ENST00000263073 TMCO5BA8MYB1 307 aa13.96□□□□□ -0.17
SMG6-201ENST00000263073 NME9Q86XW9 330 aa13.96□□□□□ -0.17
SMG6-201ENST00000263073 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
SMG6-201ENST00000263073 DNAI1Q9UI46 699 aa13.96□□□□□ -0.17
SMG6-201ENST00000263073 TIGD1Q96MW7 591 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms