RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 NOD1Q9Y239 953 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 ANKRD18AQ8IVF6 992 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 GBP2P32456 591 aaPredicted RBP18.51■□□□□ 0.55
SHANK3-201ENST00000262795 FAM193AP78312 1265 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 SYCP3Q8IZU3 236 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 JMYQ8N9B5 988 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 MAP3K2Q9Y2U5 619 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 CTCFLQ8NI51 663 aaPredicted RBP18.5■□□□□ 0.55
SHANK3-201ENST00000262795 HMGN5P82970 282 aaKnown RBP18.5■□□□□ 0.55
SHANK3-201ENST00000262795 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 PPP1R12BO60237 982 aaPredicted RBP18.5■□□□□ 0.55
SHANK3-201ENST00000262795 NUCB2P80303 420 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
SHANK3-201ENST00000262795 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
SHANK3-201ENST00000262795 ANXA1P04083 346 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 EIF5P55010 431 aaKnown RBP18.5■□□□□ 0.55
SHANK3-201ENST00000262795 BAG3O95817 575 aa18.5■□□□□ 0.55
SHANK3-201ENST00000262795 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
SHANK3-201ENST00000262795 SPOUT1Q5T280 376 aaKnown RBP18.49■□□□□ 0.55
SHANK3-201ENST00000262795 IQCA1Q86XH1 822 aa18.49■□□□□ 0.55
SHANK3-201ENST00000262795 LARP1BQ659C4 914 aaKnown RBP18.49■□□□□ 0.55
SHANK3-201ENST00000262795 FGD6Q6ZV73 1430 aa18.49■□□□□ 0.55
SHANK3-201ENST00000262795 GNPATO15228 680 aa18.49■□□□□ 0.55
SHANK3-201ENST00000262795 AKNAD1Q5T1N1 836 aa18.49■□□□□ 0.55
SHANK3-201ENST00000262795 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
SHANK3-201ENST00000262795 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
SHANK3-201ENST00000262795 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
SHANK3-201ENST00000262795 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
SHANK3-201ENST00000262795 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
SHANK3-201ENST00000262795 CASTP20810 708 aaKnown RBP18.48■□□□□ 0.55
SHANK3-201ENST00000262795 CAVIN1Q6NZI2 390 aaKnown RBP18.48■□□□□ 0.55
SHANK3-201ENST00000262795 IFNL2Q8IZJ0 200 aa18.48■□□□□ 0.55
SHANK3-201ENST00000262795 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
SHANK3-201ENST00000262795 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
SHANK3-201ENST00000262795 CFTRP13569 1480 aa18.48■□□□□ 0.55
SHANK3-201ENST00000262795 NSFL1CQ9UNZ2 370 aaKnown RBP18.47■□□□□ 0.55
SHANK3-201ENST00000262795 HAND2P61296 217 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 SLC12A7Q9Y666 1083 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 IFIT3O14879 490 aaKnown RBP18.47■□□□□ 0.55
SHANK3-201ENST00000262795 FBLN1P23142 703 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 AXDND1Q5T1B0 1012 aaPredicted RBP18.47■□□□□ 0.55
SHANK3-201ENST00000262795 CCDC191Q8NCU4 936 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 CCDC152Q4G0S7 254 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 KAT14Q9H8E8 782 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 STX8Q9UNK0 236 aa18.47■□□□□ 0.55
SHANK3-201ENST00000262795 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 PABPN1LA6NDY0 278 aaKnown RBP18.46■□□□□ 0.55
SHANK3-201ENST00000262795 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 NSD3Q9BZ95 1437 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 ZNF213O14771 459 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 TRAK2O60296 914 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-201ENST00000262795 HSP90B2PQ58FF3 399 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
SHANK3-201ENST00000262795 PROCA1Q8NCQ7 364 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-201ENST00000262795 BAG4O95429 457 aaKnown RBP18.46■□□□□ 0.54
SHANK3-201ENST00000262795 CCDC112Q8NEF3 446 aa18.46■□□□□ 0.54
SHANK3-201ENST00000262795 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
SHANK3-201ENST00000262795 ANKRD1Q15327 319 aa18.45■□□□□ 0.54
SHANK3-201ENST00000262795 GOLIM4O00461 696 aa18.45■□□□□ 0.54
SHANK3-201ENST00000262795 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
SHANK3-201ENST00000262795 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
SHANK3-201ENST00000262795 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
SHANK3-201ENST00000262795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.45■□□□□ 0.54
SHANK3-201ENST00000262795 ZC3H12CQ9C0D7 883 aaKnown RBP18.45■□□□□ 0.54
SHANK3-201ENST00000262795 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 TMEM266Q2M3C6 531 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 TNMDQ9H2S6 317 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 CCT2P78371 535 aaKnown RBP18.44■□□□□ 0.54
SHANK3-201ENST00000262795 KIAA1328Q86T90 577 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 PKD2L1Q9P0L9 805 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 CTNNA2P26232 953 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 ZYXQ15942 572 aaKnown RBP18.44■□□□□ 0.54
SHANK3-201ENST00000262795 WASF1Q92558 559 aa18.44■□□□□ 0.54
SHANK3-201ENST00000262795 TCERG1LQ5VWI1 586 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 ARL1P40616 181 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-201ENST00000262795 LUC7LQ9NQ29 371 aaKnown RBP18.43■□□□□ 0.54
SHANK3-201ENST00000262795 DACH1Q9UI36 760 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 TSG101Q99816 390 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 RGS22Q8NE09 1264 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 UQCRHLA0A096LP55 91 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 UQCRHP07919 91 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 PDCP20941 246 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
SHANK3-201ENST00000262795 CCDC39Q9UFE4 941 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
SHANK3-201ENST00000262795 ACBD3Q9H3P7 528 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 CCDC194A0A1B0GVG4 234 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 TRAPPC3LQ5T215 181 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 ERICH4A6NGS2 130 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 USP21Q9UK80 565 aa18.42■□□□□ 0.54
SHANK3-201ENST00000262795 SSRP1Q08945 709 aaKnown RBP18.41■□□□□ 0.54
SHANK3-201ENST00000262795 ARGLU1Q9NWB6 273 aaPredicted RBP18.41■□□□□ 0.54
SHANK3-201ENST00000262795 GINS2Q9Y248 185 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms