RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 ZNF165P49910 485 aa17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 RAD50Q92878 1312 aa17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 MYOM2P54296 1465 aa17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 EFCAB2Q5VUJ9 269 aa17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 ARHGEF40Q8TER5 1519 aa17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 QRICH2Q9H0J4 1663 aa17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
SLC40A1-201ENST00000261024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 OSBPL3Q9H4L5 887 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 PLA2G4DQ86XP0 818 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 C10orf67Q8IYJ2 551 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 LRRC8AQ8IWT6 810 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
SLC40A1-201ENST00000261024 LARGE1O95461 756 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 RUFY3Q7L099 469 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 TTC6Q86TZ1 520 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 TEX35Q5T0J7 233 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 FAM53CQ9NYF3 392 aa17.68■□□□□ 0.42
SLC40A1-201ENST00000261024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 GOLGA6L19H0YKK7 550 aa17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 LRRCC1Q9C099 1032 aa17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 F6X3S4 739 aa17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 USP32Q8NFA0 1604 aa17.67■□□□□ 0.42
SLC40A1-201ENST00000261024 HSPA4P34932 840 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 KRT85P78386 507 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 CLCN6P51797 869 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 SYT10Q6XYQ8 523 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 TFIP11Q9UBB9 837 aaKnown RBP17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 ZNF853P0CG23 659 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 MYO3AQ8NEV4 1616 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 RASSF4Q9H2L5 321 aa17.66■□□□□ 0.42
SLC40A1-201ENST00000261024 FAM135BQ49AJ0 1406 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 FHOD1Q9Y613 1164 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 TRIM66O15016 1216 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 PNMA6AP0CW24 399 aaPredicted RBP17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 ARHGAP29Q52LW3 1261 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 CREBRFQ8IUR6 639 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 LRRN4CLQ8ND94 238 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
SLC40A1-201ENST00000261024 KIF24Q5T7B8 1368 aa17.64■□□□□ 0.41
SLC40A1-201ENST00000261024 CCDC69A6NI79 296 aa17.64■□□□□ 0.41
SLC40A1-201ENST00000261024 SLFNL1Q499Z3 407 aa17.64■□□□□ 0.41
SLC40A1-201ENST00000261024 NYAP1Q6ZVC0 841 aa17.64■□□□□ 0.41
SLC40A1-201ENST00000261024 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
SLC40A1-201ENST00000261024 RGS22Q8NE09 1264 aa17.64■□□□□ 0.41
SLC40A1-201ENST00000261024 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 LRRFIP2Q9Y608 721 aaKnown RBP17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 ERBB3P21860 1342 aa17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 FAM193AP78312 1265 aa17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 ST5P78524 1137 aa17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 FBXW7Q969H0 707 aa17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
SLC40A1-201ENST00000261024 VGFO15240 615 aaPredicted RBP17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 PLA2G4AP47712 749 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 GYS2P54840 703 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 TDRD7Q8NHU6 1098 aaKnown RBP17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 ZCCHC17Q9NP64 241 aaKnown RBP17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 YEATS2Q9ULM3 1422 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 TMCO3Q6UWJ1 677 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
SLC40A1-201ENST00000261024 PLCH2O75038 1416 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 BECN2A8MW95 431 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 SNW1Q13573 536 aaKnown RBP17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 CCAR2Q8N163 923 aaKnown RBP17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 TTC14Q96N46 770 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 INO80Q9ULG1 1556 aaPredicted RBP17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 TPM4P67936 248 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 RNF20Q5VTR2 975 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 TXLNBQ8N3L3 684 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
SLC40A1-201ENST00000261024 NR1I2O75469 434 aa17.6■□□□□ 0.41
SLC40A1-201ENST00000261024 CWC27Q6UX04 472 aaKnown RBP17.6■□□□□ 0.41
SLC40A1-201ENST00000261024 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
SLC40A1-201ENST00000261024 EMILIN1Q9Y6C2 1016 aa17.6■□□□□ 0.41
SLC40A1-201ENST00000261024 H2AFXP16104 143 aaPredicted RBP17.6■□□□□ 0.41
SLC40A1-201ENST00000261024 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms