RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TDO2P48775 406 aa17.8■□□□□ 0.44
UBE4B-201ENST00000253251 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
UBE4B-201ENST00000253251 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
UBE4B-201ENST00000253251 KLHL34Q8N239 644 aa17.8■□□□□ 0.44
UBE4B-201ENST00000253251 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
UBE4B-201ENST00000253251 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
UBE4B-201ENST00000253251 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
UBE4B-201ENST00000253251 LTKP29376 864 aa17.79■□□□□ 0.44
UBE4B-201ENST00000253251 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
UBE4B-201ENST00000253251 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
UBE4B-201ENST00000253251 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
UBE4B-201ENST00000253251 WASF1Q92558 559 aa17.79■□□□□ 0.44
UBE4B-201ENST00000253251 ABCC3O15438 1527 aa17.79■□□□□ 0.44
UBE4B-201ENST00000253251 PES1O00541 588 aaKnown RBP17.79■□□□□ 0.44
UBE4B-201ENST00000253251 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
UBE4B-201ENST00000253251 MRE11P49959 708 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 DDB1Q16531 1140 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 TRAK2O60296 914 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 NUCB1Q02818 461 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 UBAC1Q9BSL1 405 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
UBE4B-201ENST00000253251 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
UBE4B-201ENST00000253251 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
UBE4B-201ENST00000253251 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
UBE4B-201ENST00000253251 TXLNAP40222 546 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 KRT85P78386 507 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 UBE3BQ7Z3V4 1068 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 ZMYM4Q5VZL5 1548 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 ATP8B2P98198 1209 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 BOLA2Q9H3K6 86 aa17.77■□□□□ 0.44
UBE4B-201ENST00000253251 KIF1BO60333 1816 aa17.77■□□□□ 0.43
UBE4B-201ENST00000253251 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.43
UBE4B-201ENST00000253251 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.43
UBE4B-201ENST00000253251 STK38Q15208 465 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 GRM8O00222 908 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
UBE4B-201ENST00000253251 CCDC43Q96MW1 224 aaKnown RBP17.76■□□□□ 0.43
UBE4B-201ENST00000253251 ATP7BP35670 1465 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 SLF2Q8IX21 1173 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 AK7Q96M32 723 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
UBE4B-201ENST00000253251 FAM135BQ49AJ0 1406 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 IPO7O95373 1038 aaKnown RBP17.76■□□□□ 0.43
UBE4B-201ENST00000253251 FOSBP53539 338 aa17.76■□□□□ 0.43
UBE4B-201ENST00000253251 TTC22Q5TAA0 569 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 COPS6Q7L5N1 327 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 UGGT1Q9NYU2 1555 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 PRDM15P57071 1507 aaPredicted RBP17.75■□□□□ 0.43
UBE4B-201ENST00000253251 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 SYNMO15061 1565 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 UQCRFS1P1P0C7P4 283 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 IKQ13123 557 aaPredicted RBP17.75■□□□□ 0.43
UBE4B-201ENST00000253251 RHPN1Q8TCX5 695 aa17.75■□□□□ 0.43
UBE4B-201ENST00000253251 LDHAL6AQ6ZMR3 332 aa17.74■□□□□ 0.43
UBE4B-201ENST00000253251 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
UBE4B-201ENST00000253251 KDM5CP41229 1560 aa17.74■□□□□ 0.43
UBE4B-201ENST00000253251 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
UBE4B-201ENST00000253251 CFAP45Q9UL16 551 aa17.74■□□□□ 0.43
UBE4B-201ENST00000253251 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
UBE4B-201ENST00000253251 MEIS3Q99687 375 aa17.74■□□□□ 0.43
UBE4B-201ENST00000253251 RPGRQ92834 1020 aaKnown RBP17.74■□□□□ 0.43
UBE4B-201ENST00000253251 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
UBE4B-201ENST00000253251 RNF41Q9H4P4 317 aaPredicted RBP17.73■□□□□ 0.43
UBE4B-201ENST00000253251 UNC13BO14795 1591 aa17.73■□□□□ 0.43
UBE4B-201ENST00000253251 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
UBE4B-201ENST00000253251 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
UBE4B-201ENST00000253251 ABCF2Q9UG63 623 aa17.73■□□□□ 0.43
UBE4B-201ENST00000253251 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
UBE4B-201ENST00000253251 TMOD2Q9NZR1 351 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 IGHDP01880 384 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
UBE4B-201ENST00000253251 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
UBE4B-201ENST00000253251 CCDC196A0A1B0GTZ2 297 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 CHL1O00533 1208 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 GPTP24298 496 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 PRPF40AO75400 957 aaKnown RBP17.72■□□□□ 0.43
UBE4B-201ENST00000253251 HMG20BQ9P0W2 317 aa17.72■□□□□ 0.43
UBE4B-201ENST00000253251 DHX8Q14562 1220 aaKnown RBP17.71■□□□□ 0.43
UBE4B-201ENST00000253251 IL15P40933 162 aaPredicted RBP17.71■□□□□ 0.43
UBE4B-201ENST00000253251 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
UBE4B-201ENST00000253251 LDHCP07864 332 aa17.71■□□□□ 0.43
UBE4B-201ENST00000253251 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
UBE4B-201ENST00000253251 SOGA3Q5TF21 947 aa17.71■□□□□ 0.43
UBE4B-201ENST00000253251 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
UBE4B-201ENST00000253251 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
UBE4B-201ENST00000253251 NAPBQ9H115 298 aa17.71■□□□□ 0.43
UBE4B-201ENST00000253251 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.42
UBE4B-201ENST00000253251 PCDHB15Q9Y5E8 787 aa17.71■□□□□ 0.42
UBE4B-201ENST00000253251 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.42
UBE4B-201ENST00000253251 PLA2R1Q13018 1463 aa17.71■□□□□ 0.42
UBE4B-201ENST00000253251 SLC39A6Q13433 755 aa17.7■□□□□ 0.42
UBE4B-201ENST00000253251 CFAP65Q6ZU64 1925 aaKnown RBP17.7■□□□□ 0.42
UBE4B-201ENST00000253251 FIBPO43427 364 aa17.7■□□□□ 0.42
UBE4B-201ENST00000253251 ANKIB1Q9P2G1 1089 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms