RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NCAPD2Q15021 1401 aa21.27■■□□□ 1
LRFN3-201ENST00000246529 ST18O60284 1047 aa21.27■■□□□ 1
LRFN3-201ENST00000246529 PKP1Q13835 747 aa21.27■■□□□ 1
LRFN3-201ENST00000246529 L1TD1Q5T7N2 865 aaKnown RBP21.27■■□□□ 1
LRFN3-201ENST00000246529 ZGPATQ8N5A5 531 aaKnown RBP21.27■■□□□ 1
LRFN3-201ENST00000246529 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
LRFN3-201ENST00000246529 PALD1Q9ULE6 856 aa21.27■■□□□ 1
LRFN3-201ENST00000246529 FSD2A1L4K1 749 aa21.26■□□□□ 0.99
LRFN3-201ENST00000246529 RHPN1Q8TCX5 695 aa21.26■□□□□ 0.99
LRFN3-201ENST00000246529 IL25Q9H293 177 aa21.26■□□□□ 0.99
LRFN3-201ENST00000246529 MAP3K2Q9Y2U5 619 aa21.26■□□□□ 0.99
LRFN3-201ENST00000246529 ANO2Q9NQ90 1003 aa21.26■□□□□ 0.99
LRFN3-201ENST00000246529 XRCC6P12956 609 aaKnown RBP eCLIP21.25■□□□□ 0.99
LRFN3-201ENST00000246529 C19orf44Q9H6X5 657 aa21.25■□□□□ 0.99
LRFN3-201ENST00000246529 TRPM3Q9HCF6 1732 aaPredicted RBP21.24■□□□□ 0.99
LRFN3-201ENST00000246529 ERBB3P21860 1342 aa21.24■□□□□ 0.99
LRFN3-201ENST00000246529 RAB11FIP3O75154 756 aa21.24■□□□□ 0.99
LRFN3-201ENST00000246529 NEK4P51957 841 aa21.24■□□□□ 0.99
LRFN3-201ENST00000246529 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
LRFN3-201ENST00000246529 PANK2Q9BZ23 570 aa21.24■□□□□ 0.99
LRFN3-201ENST00000246529 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
LRFN3-201ENST00000246529 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
LRFN3-201ENST00000246529 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
LRFN3-201ENST00000246529 CABLES1Q8TDN4 633 aa21.22■□□□□ 0.99
LRFN3-201ENST00000246529 BAG4O95429 457 aaKnown RBP21.22■□□□□ 0.99
LRFN3-201ENST00000246529 AIMP1Q12904 312 aaKnown RBP21.22■□□□□ 0.99
LRFN3-201ENST00000246529 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
LRFN3-201ENST00000246529 KIF1BPQ96EK5 621 aa21.21■□□□□ 0.99
LRFN3-201ENST00000246529 HEG1Q9ULI3 1381 aa21.21■□□□□ 0.99
LRFN3-201ENST00000246529 CHMP4AQ9BY43 222 aa21.21■□□□□ 0.99
LRFN3-201ENST00000246529 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
LRFN3-201ENST00000246529 KSR2Q6VAB6 950 aa21.2■□□□□ 0.98
LRFN3-201ENST00000246529 NOL8Q76FK4 1167 aaKnown RBP21.2■□□□□ 0.98
LRFN3-201ENST00000246529 AOX1Q06278 1338 aa21.2■□□□□ 0.98
LRFN3-201ENST00000246529 RGPD5Q99666 1765 aa21.19■□□□□ 0.98
LRFN3-201ENST00000246529 OS9Q13438 667 aaPredicted RBP21.19■□□□□ 0.98
LRFN3-201ENST00000246529 PA2G4Q9UQ80 394 aaKnown RBP21.19■□□□□ 0.98
LRFN3-201ENST00000246529 AK9Q5TCS8 1911 aa21.19■□□□□ 0.98
LRFN3-201ENST00000246529 RAPGEF4Q8WZA2 1011 aa21.19■□□□□ 0.98
LRFN3-201ENST00000246529 CYP2E1P05181 493 aaPredicted RBP21.18■□□□□ 0.98
LRFN3-201ENST00000246529 ATF3P18847 181 aa21.18■□□□□ 0.98
LRFN3-201ENST00000246529 OVOS2A0A0G2JMS6 1433 aa21.18■□□□□ 0.98
LRFN3-201ENST00000246529 CHRNA2Q15822 529 aa21.18■□□□□ 0.98
LRFN3-201ENST00000246529 TMEM94Q12767 1356 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 MCTP1Q6DN14 999 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 CLEC17AQ6ZS10 378 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 TMX3Q96JJ7 454 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 MCCP23508 829 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 NUCB2P80303 420 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 PDIA6Q15084 440 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 GAS2L3Q86XJ1 694 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 CHAMP1Q96JM3 812 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 UPF3BQ9BZI7 483 aaKnown RBP21.17■□□□□ 0.98
LRFN3-201ENST00000246529 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
LRFN3-201ENST00000246529 NFATC2IPQ8NCF5 419 aa21.16■□□□□ 0.98
LRFN3-201ENST00000246529 ZDHHC9Q9Y397 364 aa21.16■□□□□ 0.98
LRFN3-201ENST00000246529 MYL6BP14649 208 aa21.16■□□□□ 0.98
LRFN3-201ENST00000246529 CWC22Q9HCG8 908 aaKnown RBP21.16■□□□□ 0.98
LRFN3-201ENST00000246529 HYPKQ9NX55 129 aa21.16■□□□□ 0.98
LRFN3-201ENST00000246529 MST1RQ04912 1400 aa21.15■□□□□ 0.98
LRFN3-201ENST00000246529 ALDH1L1O75891 902 aa21.15■□□□□ 0.98
LRFN3-201ENST00000246529 CSB-PGBD3P0DP91 1061 aa21.15■□□□□ 0.98
LRFN3-201ENST00000246529 SKOR2Q2VWA4 1001 aaPredicted RBP21.15■□□□□ 0.98
LRFN3-201ENST00000246529 ZNF790Q6PG37 636 aa21.15■□□□□ 0.98
LRFN3-201ENST00000246529 KDM6AO15550 1401 aaPredicted RBP21.15■□□□□ 0.98
LRFN3-201ENST00000246529 FOXD4L5Q5VV16 416 aaPredicted RBP21.15■□□□□ 0.98
LRFN3-201ENST00000246529 FOXD4L4Q8WXT5 416 aaPredicted RBP21.15■□□□□ 0.98
LRFN3-201ENST00000246529 SUCLG2Q96I99 432 aa21.15■□□□□ 0.98
LRFN3-201ENST00000246529 DDX21Q9NR30 783 aaKnown RBP eCLIP21.15■□□□□ 0.98
LRFN3-201ENST00000246529 NPHP3Q7Z494 1330 aa21.15■□□□□ 0.98
LRFN3-201ENST00000246529 GOLGA6L22H0YM25 854 aa21.14■□□□□ 0.98
LRFN3-201ENST00000246529 MTX1Q13505 466 aa21.14■□□□□ 0.98
LRFN3-201ENST00000246529 SLC52A2Q9HAB3 445 aa21.14■□□□□ 0.98
LRFN3-201ENST00000246529 KIF1AQ12756 1690 aa21.14■□□□□ 0.97
LRFN3-201ENST00000246529 PHKG2P15735 406 aa21.14■□□□□ 0.97
LRFN3-201ENST00000246529 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
LRFN3-201ENST00000246529 KAZALD1Q96I82 304 aa21.14■□□□□ 0.97
LRFN3-201ENST00000246529 GRPEL1Q9HAV7 217 aa21.14■□□□□ 0.97
LRFN3-201ENST00000246529 MEGF6O75095 1541 aa21.13■□□□□ 0.97
LRFN3-201ENST00000246529 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
LRFN3-201ENST00000246529 HSP90AB4PQ58FF6 505 aa21.13■□□□□ 0.97
LRFN3-201ENST00000246529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.13■□□□□ 0.97
LRFN3-201ENST00000246529 ALS2Q96Q42 1657 aa21.13■□□□□ 0.97
LRFN3-201ENST00000246529 DDX49Q9Y6V7 483 aaKnown RBP21.13■□□□□ 0.97
LRFN3-201ENST00000246529 MRE11P49959 708 aa21.12■□□□□ 0.97
LRFN3-201ENST00000246529 LINS1Q8NG48 757 aa21.12■□□□□ 0.97
LRFN3-201ENST00000246529 GRM8O00222 908 aa21.12■□□□□ 0.97
LRFN3-201ENST00000246529 PTMSP20962 102 aa21.12■□□□□ 0.97
LRFN3-201ENST00000246529 ANAPC15P60006 121 aa21.12■□□□□ 0.97
LRFN3-201ENST00000246529 CWC27Q6UX04 472 aaKnown RBP21.12■□□□□ 0.97
LRFN3-201ENST00000246529 CNTROBQ8N137 903 aa21.12■□□□□ 0.97
LRFN3-201ENST00000246529 BICC1Q9H694 974 aaKnown RBP21.12■□□□□ 0.97
LRFN3-201ENST00000246529 SGSM2O43147 1006 aa21.11■□□□□ 0.97
LRFN3-201ENST00000246529 IGKV5-2P06315 115 aa21.11■□□□□ 0.97
LRFN3-201ENST00000246529 RIC3Q7Z5B4 369 aa21.11■□□□□ 0.97
LRFN3-201ENST00000246529 SIPA1L3O60292 1781 aaPredicted RBP21.11■□□□□ 0.97
LRFN3-201ENST00000246529 CLASRPQ8N2M8 674 aaKnown RBP21.11■□□□□ 0.97
LRFN3-201ENST00000246529 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
LRFN3-201ENST00000246529 DDX58O95786 925 aaKnown RBP21.1■□□□□ 0.97
LRFN3-201ENST00000246529 HSPA4P34932 840 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms