RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
HOXC13-201ENST00000243056 HMGN5P82970 282 aaKnown RBP24.23■■□□□ 1.47
HOXC13-201ENST00000243056 TSPYL6Q8N831 410 aa24.23■■□□□ 1.47
HOXC13-201ENST00000243056 COL18A1P39060 1754 aa24.23■■□□□ 1.47
HOXC13-201ENST00000243056 RLBP1P12271 317 aa24.23■■□□□ 1.47
HOXC13-201ENST00000243056 BCL2L12Q9HB09 334 aa24.23■■□□□ 1.47
HOXC13-201ENST00000243056 CPDO75976 1380 aa24.23■■□□□ 1.47
HOXC13-201ENST00000243056 LARP1Q6PKG0 1096 aaKnown RBP24.22■■□□□ 1.47
HOXC13-201ENST00000243056 LGR6Q9HBX8 967 aa24.22■■□□□ 1.47
HOXC13-201ENST00000243056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.22■■□□□ 1.47
HOXC13-201ENST00000243056 U2AF2P26368 475 aaKnown RBP eCLIP24.22■■□□□ 1.47
HOXC13-201ENST00000243056 IL17REQ8NFR9 667 aa24.22■■□□□ 1.47
HOXC13-201ENST00000243056 CERKQ8TCT0 537 aa24.22■■□□□ 1.47
HOXC13-201ENST00000243056 TOM1L2Q6ZVM7 507 aa24.21■■□□□ 1.47
HOXC13-201ENST00000243056 RTF1Q92541 710 aaKnown RBP24.21■■□□□ 1.47
HOXC13-201ENST00000243056 BTG4Q9NY30 223 aa24.21■■□□□ 1.47
HOXC13-201ENST00000243056 PDCL2Q8N4E4 241 aa24.21■■□□□ 1.47
HOXC13-201ENST00000243056 NCBP3Q53F19 620 aaKnown RBP24.2■■□□□ 1.46
HOXC13-201ENST00000243056 MPRIPQ6WCQ1 1025 aa24.2■■□□□ 1.46
HOXC13-201ENST00000243056 GAS2L2Q8NHY3 880 aa24.2■■□□□ 1.46
HOXC13-201ENST00000243056 RWDD1Q9H446 243 aaPredicted RBP24.2■■□□□ 1.46
HOXC13-201ENST00000243056 ZNF530Q6P9A1 599 aaPredicted RBP24.2■■□□□ 1.46
HOXC13-201ENST00000243056 GNAT3A8MTJ3 354 aa24.19■■□□□ 1.46
HOXC13-201ENST00000243056 KIF3AQ9Y496 699 aa24.19■■□□□ 1.46
HOXC13-201ENST00000243056 KCNJ4P48050 445 aa24.19■■□□□ 1.46
HOXC13-201ENST00000243056 EVA1CP58658 441 aa24.19■■□□□ 1.46
HOXC13-201ENST00000243056 MCTP1Q6DN14 999 aa24.19■■□□□ 1.46
HOXC13-201ENST00000243056 RBM27Q9P2N5 1060 aaKnown RBP24.19■■□□□ 1.46
HOXC13-201ENST00000243056 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
HOXC13-201ENST00000243056 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
HOXC13-201ENST00000243056 RARSP54136 660 aaKnown RBP24.18■■□□□ 1.46
HOXC13-201ENST00000243056 C8orf58Q8NAV2 365 aa24.18■■□□□ 1.46
HOXC13-201ENST00000243056 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
HOXC13-201ENST00000243056 KIF2CQ99661 725 aa24.18■■□□□ 1.46
HOXC13-201ENST00000243056 LMBRD1Q9NUN5 540 aa24.18■■□□□ 1.46
HOXC13-201ENST00000243056 AHDC1Q5TGY3 1603 aaPredicted RBP24.17■■□□□ 1.46
HOXC13-201ENST00000243056 CHMP4AQ9BY43 222 aa24.16■■□□□ 1.46
HOXC13-201ENST00000243056 ABCA3Q99758 1704 aa24.16■■□□□ 1.46
HOXC13-201ENST00000243056 IL16Q14005 1332 aa24.16■■□□□ 1.46
HOXC13-201ENST00000243056 PHLPP1O60346 1717 aa24.16■■□□□ 1.46
HOXC13-201ENST00000243056 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
HOXC13-201ENST00000243056 GNAI1P63096 354 aa24.15■■□□□ 1.46
HOXC13-201ENST00000243056 IFT57Q9NWB7 429 aa24.15■■□□□ 1.46
HOXC13-201ENST00000243056 MEGF6O75095 1541 aa24.15■■□□□ 1.46
HOXC13-201ENST00000243056 K7ELQ4 463 aaPredicted RBP24.14■■□□□ 1.46
HOXC13-201ENST00000243056 WDR17Q8IZU2 1322 aa24.14■■□□□ 1.45
HOXC13-201ENST00000243056 COL5A2P05997 1499 aaPredicted RBP24.14■■□□□ 1.45
HOXC13-201ENST00000243056 PLEKHO1Q53GL0 409 aaPredicted RBP24.13■■□□□ 1.45
HOXC13-201ENST00000243056 MAP3K5Q99683 1374 aa24.13■■□□□ 1.45
HOXC13-201ENST00000243056 CRB1P82279 1406 aa24.13■■□□□ 1.45
HOXC13-201ENST00000243056 AK9Q5TCS8 1911 aa24.13■■□□□ 1.45
HOXC13-201ENST00000243056 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
HOXC13-201ENST00000243056 PTMAP06454 111 aaKnown RBP24.13■■□□□ 1.45
HOXC13-201ENST00000243056 SLC20A2Q08357 652 aa24.13■■□□□ 1.45
HOXC13-201ENST00000243056 SSH1Q8WYL5 1049 aa24.12■■□□□ 1.45
HOXC13-201ENST00000243056 KLHL34Q8N239 644 aa24.12■■□□□ 1.45
HOXC13-201ENST00000243056 CHL1O00533 1208 aa24.11■■□□□ 1.45
HOXC13-201ENST00000243056 LRSAM1Q6UWE0 723 aa24.11■■□□□ 1.45
HOXC13-201ENST00000243056 TEX2Q8IWB9 1127 aa24.11■■□□□ 1.45
HOXC13-201ENST00000243056 C17orf53Q8N3J3 647 aaPredicted RBP24.11■■□□□ 1.45
HOXC13-201ENST00000243056 GPT2Q8TD30 523 aa24.11■■□□□ 1.45
HOXC13-201ENST00000243056 PIBF1Q8WXW3 757 aa24.11■■□□□ 1.45
HOXC13-201ENST00000243056 TSPYL4Q9UJ04 414 aa24.11■■□□□ 1.45
HOXC13-201ENST00000243056 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
HOXC13-201ENST00000243056 NOLC1Q14978 699 aaKnown RBP eCLIP24.1■■□□□ 1.45
HOXC13-201ENST00000243056 ANKRD7Q92527 254 aa24.1■■□□□ 1.45
HOXC13-201ENST00000243056 RBM42Q9BTD8 480 aaKnown RBP24.1■■□□□ 1.45
HOXC13-201ENST00000243056 NCAPD2Q15021 1401 aa24.1■■□□□ 1.45
HOXC13-201ENST00000243056 RNF214Q8ND24 703 aa24.1■■□□□ 1.45
HOXC13-201ENST00000243056 IRX3P78415 501 aaPredicted RBP24.09■■□□□ 1.45
HOXC13-201ENST00000243056 SYCE3A1L190 88 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 KCNQ3O43525 872 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 VAMP4O75379 141 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 CHRM1P11229 460 aaPredicted RBP24.09■■□□□ 1.45
HOXC13-201ENST00000243056 C1orf141Q5JVX7 400 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 CERS3Q8IU89 383 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 MPNDQ8N594 471 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 SMC4Q9NTJ3 1288 aa24.09■■□□□ 1.45
HOXC13-201ENST00000243056 LMO7Q8WWI1 1683 aa24.08■■□□□ 1.45
HOXC13-201ENST00000243056 DNAJC2Q99543 621 aaKnown RBP24.08■■□□□ 1.45
HOXC13-201ENST00000243056 TWISTNBQ3B726 338 aaPredicted RBP24.08■■□□□ 1.44
HOXC13-201ENST00000243056 CYP27B1O15528 508 aa24.07■■□□□ 1.44
HOXC13-201ENST00000243056 AKAP4Q5JQC9 854 aa24.07■■□□□ 1.44
HOXC13-201ENST00000243056 SECISBP2LQ93073 1101 aaKnown RBP24.07■■□□□ 1.44
HOXC13-201ENST00000243056 TMEM63CQ9P1W3 806 aa24.07■■□□□ 1.44
HOXC13-201ENST00000243056 FAM208AQ9UK61 1670 aaKnown RBP24.07■■□□□ 1.44
HOXC13-201ENST00000243056 SLFN14P0C7P3 912 aa24.06■■□□□ 1.44
HOXC13-201ENST00000243056 AMOTQ4VCS5 1084 aa24.06■■□□□ 1.44
HOXC13-201ENST00000243056 NECTIN2Q92692 538 aa24.06■■□□□ 1.44
HOXC13-201ENST00000243056 HSPA1LP34931 641 aa24.06■■□□□ 1.44
HOXC13-201ENST00000243056 GABPB1Q06547 395 aaPredicted RBP24.05■■□□□ 1.44
HOXC13-201ENST00000243056 RGS22Q8NE09 1264 aa24.05■■□□□ 1.44
HOXC13-201ENST00000243056 FKBP5Q13451 457 aaPredicted RBP24.05■■□□□ 1.44
HOXC13-201ENST00000243056 DDX54Q8TDD1 881 aaKnown RBP24.05■■□□□ 1.44
HOXC13-201ENST00000243056 FEZ1Q99689 392 aa24.04■■□□□ 1.44
HOXC13-201ENST00000243056 OGFRQ9NZT2 677 aa24.04■■□□□ 1.44
HOXC13-201ENST00000243056 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
HOXC13-201ENST00000243056 CAPN2P17655 700 aa24.04■■□□□ 1.44
HOXC13-201ENST00000243056 PRPF40AO75400 957 aaKnown RBP24.03■■□□□ 1.44
HOXC13-201ENST00000243056 PKP1Q13835 747 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms