RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PDIA4P13667 645 aaKnown RBP15.57■□□□□ 0.08
NEK4-201ENST00000233027 IBSPP21815 317 aaPredicted RBP15.57■□□□□ 0.08
NEK4-201ENST00000233027 SPA17Q15506 151 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 ZSCAN23Q3MJ62 389 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 PAF1Q8N7H5 531 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 ABCC11Q96J66 1382 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 TMC6Q7Z403 805 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 KIF2AO00139 706 aaPredicted RBP15.56■□□□□ 0.08
NEK4-201ENST00000233027 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 TBC1D32Q96NH3 1257 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
NEK4-201ENST00000233027 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 STX6O43752 255 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 MPRIPQ6WCQ1 1025 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 ZRSR2Q15696 482 aaKnown RBP15.56■□□□□ 0.08
NEK4-201ENST00000233027 JAKMIP3Q5VZ66 844 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 RAB11FIP4Q86YS3 637 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
NEK4-201ENST00000233027 DISP3Q9P2K9 1392 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
NEK4-201ENST00000233027 AKAP2Q9Y2D5 859 aa15.56■□□□□ 0.08
NEK4-201ENST00000233027 GOLGA8BA8MQT2 603 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 CNNM3Q8NE01 707 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 ZNF830Q96NB3 372 aaPredicted RBP15.55■□□□□ 0.08
NEK4-201ENST00000233027 NUP88Q99567 741 aaPredicted RBP15.55■□□□□ 0.08
NEK4-201ENST00000233027 NAPBQ9H115 298 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 CCDC141Q6ZP82 1450 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 DNAAF4Q8WXU2 420 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 CCDC113Q9H0I3 377 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 ABCC5O15440 1437 aa15.55■□□□□ 0.08
NEK4-201ENST00000233027 ADGRF5Q8IZF2 1346 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 ZNF213O14771 459 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 SLC12A7Q9Y666 1083 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 GBP3Q9H0R5 595 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 FAM135AQ9P2D6 1515 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 SSRP1Q08945 709 aaKnown RBP15.54■□□□□ 0.08
NEK4-201ENST00000233027 CCDC178Q5BJE1 867 aa15.54■□□□□ 0.08
NEK4-201ENST00000233027 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 GBP2P32456 591 aaPredicted RBP15.53■□□□□ 0.08
NEK4-201ENST00000233027 FKBP15Q5T1M5 1219 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 GOLGA8AA7E2F4 631 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 BMP2KLQ5H9B9 411 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 GIMAP6Q6P9H5 292 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 CACNA2D4Q7Z3S7 1137 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
NEK4-201ENST00000233027 SEC63Q9UGP8 760 aaKnown RBP15.53■□□□□ 0.08
NEK4-201ENST00000233027 SHTN1A0MZ66 631 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 POLR3DP05423 398 aaPredicted RBP15.53■□□□□ 0.08
NEK4-201ENST00000233027 STX1AQ16623 288 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 UBA5Q9GZZ9 404 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
NEK4-201ENST00000233027 CTAGE5O15320 804 aa15.52■□□□□ 0.08
NEK4-201ENST00000233027 HMGB1P09429 215 aaKnown RBP15.52■□□□□ 0.08
NEK4-201ENST00000233027 FLIIQ13045 1269 aa15.52■□□□□ 0.08
NEK4-201ENST00000233027 PANK2Q9BZ23 570 aa15.52■□□□□ 0.08
NEK4-201ENST00000233027 DDX19AQ9NUU7 478 aaKnown RBP15.52■□□□□ 0.08
NEK4-201ENST00000233027 KRI1Q8N9T8 703 aaKnown RBP15.52■□□□□ 0.08
NEK4-201ENST00000233027 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
NEK4-201ENST00000233027 MAP3K2Q9Y2U5 619 aa15.52■□□□□ 0.08
NEK4-201ENST00000233027 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.07
NEK4-201ENST00000233027 EVI5LQ96CN4 794 aa15.52■□□□□ 0.07
NEK4-201ENST00000233027 BCCIPQ9P287 314 aaKnown RBP eCLIP15.52■□□□□ 0.07
NEK4-201ENST00000233027 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
NEK4-201ENST00000233027 PTPRCP08575 1304 aa15.52■□□□□ 0.07
NEK4-201ENST00000233027 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.07
NEK4-201ENST00000233027 STARD3NLO95772 234 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 MKNK2Q9HBH9 465 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
NEK4-201ENST00000233027 GOLIM4O00461 696 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 IFIT3O14879 490 aaKnown RBP15.51■□□□□ 0.07
NEK4-201ENST00000233027 GTF2F1P35269 517 aaKnown RBP eCLIP15.51■□□□□ 0.07
NEK4-201ENST00000233027 USP8P40818 1118 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 HAND2P61296 217 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 DYDC1Q8WWB3 177 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 TSG101Q99816 390 aa15.51■□□□□ 0.07
NEK4-201ENST00000233027 MAP9Q49MG5 647 aa15.5■□□□□ 0.07
NEK4-201ENST00000233027 NECAB1Q8N987 351 aa15.5■□□□□ 0.07
NEK4-201ENST00000233027 JARID2Q92833 1246 aaPredicted RBP15.5■□□□□ 0.07
NEK4-201ENST00000233027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.07
NEK4-201ENST00000233027 SNW1Q13573 536 aaKnown RBP15.5■□□□□ 0.07
NEK4-201ENST00000233027 CEP135Q66GS9 1140 aa15.5■□□□□ 0.07
NEK4-201ENST00000233027 CNPY2Q9Y2B0 182 aa15.5■□□□□ 0.07
NEK4-201ENST00000233027 NUCB1Q02818 461 aa15.5■□□□□ 0.07
NEK4-201ENST00000233027 KLHL40Q2TBA0 621 aa15.5■□□□□ 0.07
NEK4-201ENST00000233027 IFIT5Q13325 482 aaKnown RBP15.49■□□□□ 0.07
NEK4-201ENST00000233027 LUZP1Q86V48 1076 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 TMX3Q96JJ7 454 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
NEK4-201ENST00000233027 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
NEK4-201ENST00000233027 FBLN1P23142 703 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 NLRP5P59047 1200 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 ANKLE2Q86XL3 938 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 KCNH5Q8NCM2 988 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 UBE2HP62256 183 aa15.49■□□□□ 0.07
NEK4-201ENST00000233027 MAP2K1Q02750 393 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms