RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 GLRX3O76003 335 aaKnown RBP16.1■□□□□ 0.17
HCFC2-201ENST00000229330 ATP10BO94823 1461 aa16.1■□□□□ 0.17
HCFC2-201ENST00000229330 CT47A1Q5JQC4 288 aaPredicted RBP16.1■□□□□ 0.17
HCFC2-201ENST00000229330 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
HCFC2-201ENST00000229330 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 RRS1Q15050 365 aaKnown RBP16.09■□□□□ 0.17
HCFC2-201ENST00000229330 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 TFIP11Q9UBB9 837 aaKnown RBP16.09■□□□□ 0.17
HCFC2-201ENST00000229330 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 NUDT16Q96DE0 195 aaKnown RBP16.09■□□□□ 0.17
HCFC2-201ENST00000229330 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 DNAAF4Q8WXU2 420 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 TRIM22Q8IYM9 498 aa16.09■□□□□ 0.17
HCFC2-201ENST00000229330 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.17
HCFC2-201ENST00000229330 MNAT1P51948 309 aa16.08■□□□□ 0.17
HCFC2-201ENST00000229330 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.17
HCFC2-201ENST00000229330 THUMPD2Q9BTF0 503 aaKnown RBP16.08■□□□□ 0.17
HCFC2-201ENST00000229330 CDKL5O76039 1030 aa16.08■□□□□ 0.16
HCFC2-201ENST00000229330 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
HCFC2-201ENST00000229330 IDI1Q13907 227 aa16.08■□□□□ 0.16
HCFC2-201ENST00000229330 ZRSR2Q15696 482 aaKnown RBP16.08■□□□□ 0.16
HCFC2-201ENST00000229330 LARP6Q9BRS8 491 aaKnown RBP16.08■□□□□ 0.16
HCFC2-201ENST00000229330 ARFGAP3Q9NP61 516 aa16.08■□□□□ 0.16
HCFC2-201ENST00000229330 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.16
HCFC2-201ENST00000229330 SIL1Q9H173 461 aa16.08■□□□□ 0.16
HCFC2-201ENST00000229330 TMX1Q9H3N1 280 aa16.08■□□□□ 0.16
HCFC2-201ENST00000229330 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
HCFC2-201ENST00000229330 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.07■□□□□ 0.16
HCFC2-201ENST00000229330 V9GYY5 206 aaPredicted RBP16.07■□□□□ 0.16
HCFC2-201ENST00000229330 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
HCFC2-201ENST00000229330 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
HCFC2-201ENST00000229330 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
HCFC2-201ENST00000229330 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
HCFC2-201ENST00000229330 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
HCFC2-201ENST00000229330 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
HCFC2-201ENST00000229330 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
HCFC2-201ENST00000229330 RNF187Q5TA31 235 aaPredicted RBP16.06■□□□□ 0.16
HCFC2-201ENST00000229330 INCENPQ9NQS7 918 aa16.06■□□□□ 0.16
HCFC2-201ENST00000229330 GNG11P61952 73 aa16.06■□□□□ 0.16
HCFC2-201ENST00000229330 RBM33Q96EV2 1170 aaKnown RBP16.06■□□□□ 0.16
HCFC2-201ENST00000229330 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
HCFC2-201ENST00000229330 CTR9Q6PD62 1173 aa16.06■□□□□ 0.16
HCFC2-201ENST00000229330 TUBB4AP04350 444 aa16.05■□□□□ 0.16
HCFC2-201ENST00000229330 ZNF445P59923 1031 aa16.05■□□□□ 0.16
HCFC2-201ENST00000229330 SDSP20132 328 aa16.05■□□□□ 0.16
HCFC2-201ENST00000229330 GABPB1Q06547 395 aaPredicted RBP16.05■□□□□ 0.16
HCFC2-201ENST00000229330 PTGS1P23219 599 aa16.05■□□□□ 0.16
HCFC2-201ENST00000229330 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 RSPH14Q9UHP6 348 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 TAX1BP1Q86VP1 789 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 CCAR1Q8IX12 1150 aaKnown RBP16.04■□□□□ 0.16
HCFC2-201ENST00000229330 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
HCFC2-201ENST00000229330 DNAI1Q9UI46 699 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 CTNNA3Q9UI47 895 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 SLC3A2P08195 630 aaKnown RBP16.04■□□□□ 0.16
HCFC2-201ENST00000229330 PIBF1Q8WXW3 757 aa16.04■□□□□ 0.16
HCFC2-201ENST00000229330 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
HCFC2-201ENST00000229330 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
HCFC2-201ENST00000229330 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.16
HCFC2-201ENST00000229330 IMMTQ16891 758 aaKnown RBP16.03■□□□□ 0.16
HCFC2-201ENST00000229330 TATP17735 454 aaPredicted RBP16.03■□□□□ 0.16
HCFC2-201ENST00000229330 CCDC158Q5M9N0 1113 aa16.03■□□□□ 0.16
HCFC2-201ENST00000229330 CCDC12Q8WUD4 166 aaPredicted RBP16.03■□□□□ 0.16
HCFC2-201ENST00000229330 NOS1P29475 1434 aa16.03■□□□□ 0.16
HCFC2-201ENST00000229330 ANAPC15P60006 121 aa16.03■□□□□ 0.16
HCFC2-201ENST00000229330 VPS37DQ86XT2 251 aa16.02■□□□□ 0.16
HCFC2-201ENST00000229330 ZNF530Q6P9A1 599 aaPredicted RBP16.02■□□□□ 0.16
HCFC2-201ENST00000229330 ZSWIM4Q9H7M6 989 aa16.02■□□□□ 0.16
HCFC2-201ENST00000229330 PLCH2O75038 1416 aa16.02■□□□□ 0.16
HCFC2-201ENST00000229330 CCDC69A6NI79 296 aa16.02■□□□□ 0.15
HCFC2-201ENST00000229330 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.15
HCFC2-201ENST00000229330 IL16Q14005 1332 aa16.02■□□□□ 0.15
HCFC2-201ENST00000229330 RIOK3O14730 519 aaKnown RBP16.02■□□□□ 0.15
HCFC2-201ENST00000229330 TTC39AQ5SRH9 613 aa16.02■□□□□ 0.15
HCFC2-201ENST00000229330 ZGPATQ8N5A5 531 aaKnown RBP16.02■□□□□ 0.15
HCFC2-201ENST00000229330 BIN1O00499 593 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 TTC31Q49AM3 519 aaPredicted RBP16.01■□□□□ 0.15
HCFC2-201ENST00000229330 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
HCFC2-201ENST00000229330 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.01■□□□□ 0.15
HCFC2-201ENST00000229330 STRN4Q9NRL3 753 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 F13A1P00488 732 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 CAPN2P17655 700 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 C10orf67Q8IYJ2 551 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 TAF4BQ92750 862 aa16.01■□□□□ 0.15
HCFC2-201ENST00000229330 ENOX2Q16206 610 aaKnown RBP16.01■□□□□ 0.15
HCFC2-201ENST00000229330 TYRO3Q06418 890 aa16■□□□□ 0.15
HCFC2-201ENST00000229330 C8orf76Q96K31 380 aa16■□□□□ 0.15
HCFC2-201ENST00000229330 GUCY1B3Q02153 619 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms