RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 EIF5BO60841 1220 aaKnown RBP23.69■■□□□ 1.38
YBX3-201ENST00000228251 PROSER3Q2NL68 480 aa23.69■■□□□ 1.38
YBX3-201ENST00000228251 SPG7Q9UQ90 795 aa23.69■■□□□ 1.38
YBX3-201ENST00000228251 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
YBX3-201ENST00000228251 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
YBX3-201ENST00000228251 LRRCC1Q9C099 1032 aa23.68■■□□□ 1.38
YBX3-201ENST00000228251 NHSL1Q5SYE7 1610 aa23.68■■□□□ 1.38
YBX3-201ENST00000228251 SLKQ9H2G2 1235 aaPredicted RBP23.68■■□□□ 1.38
YBX3-201ENST00000228251 FRAT2O75474 233 aaPredicted RBP23.67■■□□□ 1.38
YBX3-201ENST00000228251 NBPF7P0C2Y1 421 aaPredicted RBP23.66■■□□□ 1.38
YBX3-201ENST00000228251 PDIA6Q15084 440 aa23.66■■□□□ 1.38
YBX3-201ENST00000228251 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
YBX3-201ENST00000228251 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
YBX3-201ENST00000228251 LAMB4A4D0S4 1761 aa23.66■■□□□ 1.38
YBX3-201ENST00000228251 CYP27B1O15528 508 aa23.65■■□□□ 1.38
YBX3-201ENST00000228251 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
YBX3-201ENST00000228251 SHANK3Q9BYB0 1731 aa23.65■■□□□ 1.38
YBX3-201ENST00000228251 DDIT3P35638 169 aa23.65■■□□□ 1.38
YBX3-201ENST00000228251 KSR2Q6VAB6 950 aa23.65■■□□□ 1.38
YBX3-201ENST00000228251 DDX21Q9NR30 783 aaKnown RBP eCLIP23.65■■□□□ 1.38
YBX3-201ENST00000228251 HYPKQ9NX55 129 aa23.65■■□□□ 1.38
YBX3-201ENST00000228251 ALDH1L1O75891 902 aa23.64■■□□□ 1.37
YBX3-201ENST00000228251 MTX1Q13505 466 aa23.64■■□□□ 1.37
YBX3-201ENST00000228251 PPP1R42Q7Z4L9 355 aa23.64■■□□□ 1.37
YBX3-201ENST00000228251 USP26Q9BXU7 913 aa23.64■■□□□ 1.37
YBX3-201ENST00000228251 HSCBQ8IWL3 235 aa23.63■■□□□ 1.37
YBX3-201ENST00000228251 AOX1Q06278 1338 aa23.63■■□□□ 1.37
YBX3-201ENST00000228251 ZNF335Q9H4Z2 1342 aaPredicted RBP23.63■■□□□ 1.37
YBX3-201ENST00000228251 UBR2Q8IWV8 1755 aa23.62■■□□□ 1.37
YBX3-201ENST00000228251 CSB-PGBD3P0DP91 1061 aa23.62■■□□□ 1.37
YBX3-201ENST00000228251 DCAF5Q96JK2 942 aa23.62■■□□□ 1.37
YBX3-201ENST00000228251 MAP3K2Q9Y2U5 619 aa23.62■■□□□ 1.37
YBX3-201ENST00000228251 COL5A2P05997 1499 aaPredicted RBP23.61■■□□□ 1.37
YBX3-201ENST00000228251 RAB11FIP3O75154 756 aa23.61■■□□□ 1.37
YBX3-201ENST00000228251 MX1P20591 662 aa23.61■■□□□ 1.37
YBX3-201ENST00000228251 UTYO14607 1347 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 SLC39A6Q13433 755 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 NFATC2IPQ8NCF5 419 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 PAPPAQ13219 1627 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 AK9Q5TCS8 1911 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 WDR17Q8IZU2 1322 aa23.6■■□□□ 1.37
YBX3-201ENST00000228251 CD2BP2O95400 341 aaKnown RBP23.59■■□□□ 1.37
YBX3-201ENST00000228251 LRP10Q7Z4F1 713 aa23.59■■□□□ 1.37
YBX3-201ENST00000228251 ZNF496Q96IT1 587 aaPredicted RBP23.57■■□□□ 1.36
YBX3-201ENST00000228251 BCL11AQ9H165 835 aa23.57■■□□□ 1.36
YBX3-201ENST00000228251 SRGAP3O43295 1099 aa23.57■■□□□ 1.36
YBX3-201ENST00000228251 HSP90AB1P08238 724 aaKnown RBP23.57■■□□□ 1.36
YBX3-201ENST00000228251 LINS1Q8NG48 757 aa23.57■■□□□ 1.36
YBX3-201ENST00000228251 RBM42Q9BTD8 480 aaKnown RBP23.57■■□□□ 1.36
YBX3-201ENST00000228251 TSHZ3Q63HK5 1081 aa23.56■■□□□ 1.36
YBX3-201ENST00000228251 CASC1Q6TDU7 716 aa23.56■■□□□ 1.36
YBX3-201ENST00000228251 CHMP5Q9NZZ3 219 aa23.56■■□□□ 1.36
YBX3-201ENST00000228251 ARFGEF2Q9Y6D5 1785 aa23.56■■□□□ 1.36
YBX3-201ENST00000228251 RHPN1Q8TCX5 695 aa23.55■■□□□ 1.36
YBX3-201ENST00000228251 SURF6O75683 361 aaKnown RBP23.55■■□□□ 1.36
YBX3-201ENST00000228251 ERC2O15083 957 aa23.54■■□□□ 1.36
YBX3-201ENST00000228251 DDX58O95786 925 aaKnown RBP23.53■■□□□ 1.36
YBX3-201ENST00000228251 RABEP1Q15276 862 aa23.53■■□□□ 1.36
YBX3-201ENST00000228251 CWF19L2Q2TBE0 894 aaKnown RBP23.53■■□□□ 1.36
YBX3-201ENST00000228251 SPRYD3Q8NCJ5 442 aa23.53■■□□□ 1.36
YBX3-201ENST00000228251 KIF1BPQ96EK5 621 aa23.53■■□□□ 1.36
YBX3-201ENST00000228251 KAZALD1Q96I82 304 aa23.53■■□□□ 1.36
YBX3-201ENST00000228251 USP42Q9H9J4 1324 aaKnown RBP23.53■■□□□ 1.36
YBX3-201ENST00000228251 REC8O95072 547 aa23.52■■□□□ 1.36
YBX3-201ENST00000228251 IGKV5-2P06315 115 aa23.52■■□□□ 1.36
YBX3-201ENST00000228251 IL1RAPL2Q9NP60 686 aa23.52■■□□□ 1.36
YBX3-201ENST00000228251 PRDM11Q9NQV5 511 aa23.52■■□□□ 1.36
YBX3-201ENST00000228251 AFDNP55196 1824 aaKnown RBP23.52■■□□□ 1.36
YBX3-201ENST00000228251 K7ELQ4 463 aaPredicted RBP23.52■■□□□ 1.36
YBX3-201ENST00000228251 GRM8O00222 908 aa23.51■■□□□ 1.35
YBX3-201ENST00000228251 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
YBX3-201ENST00000228251 PI4K2BQ8TCG2 481 aa23.51■■□□□ 1.35
YBX3-201ENST00000228251 HSP90AB4PQ58FF6 505 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 ESYT1Q9BSJ8 1104 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 TOGARAM1Q9Y4F4 1720 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 CHMLP26374 656 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 NKX1-1Q15270 411 aaPredicted RBP23.5■■□□□ 1.35
YBX3-201ENST00000228251 UNC5CLQ8IV45 518 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 FMNL2Q96PY5 1086 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 C9orf78Q9NZ63 289 aaPredicted RBP23.5■■□□□ 1.35
YBX3-201ENST00000228251 CIZ1Q9ULV3 898 aaPredicted RBP23.5■■□□□ 1.35
YBX3-201ENST00000228251 HDAC5Q9UQL6 1122 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 USP16Q9Y5T5 823 aa23.5■■□□□ 1.35
YBX3-201ENST00000228251 PCDH11XQ9BZA7 1347 aa23.49■■□□□ 1.35
YBX3-201ENST00000228251 PCDH11YQ9BZA8 1340 aa23.49■■□□□ 1.35
YBX3-201ENST00000228251 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
YBX3-201ENST00000228251 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
YBX3-201ENST00000228251 NUP188Q5SRE5 1749 aa23.49■■□□□ 1.35
YBX3-201ENST00000228251 GSE1Q14687 1217 aa23.48■■□□□ 1.35
YBX3-201ENST00000228251 XAGE3Q8WTP9 111 aa23.48■■□□□ 1.35
YBX3-201ENST00000228251 SUCLG2Q96I99 432 aa23.48■■□□□ 1.35
YBX3-201ENST00000228251 NUTM1Q86Y26 1132 aa23.47■■□□□ 1.35
YBX3-201ENST00000228251 ZCRB1Q8TBF4 217 aaKnown RBP23.47■■□□□ 1.35
YBX3-201ENST00000228251 IL17RAQ96F46 866 aa23.47■■□□□ 1.35
YBX3-201ENST00000228251 METTL22Q9BUU2 404 aaPredicted RBP23.47■■□□□ 1.35
YBX3-201ENST00000228251 NEURL1BA8MQ27 555 aa23.47■■□□□ 1.35
YBX3-201ENST00000228251 CABP4P57796 275 aa23.47■■□□□ 1.35
YBX3-201ENST00000228251 AIMP1Q12904 312 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms