RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TMEM51Q9NW97 253 aa17■□□□□ 0.31
SF1-201ENST00000227503 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
SF1-201ENST00000227503 ARHGEF10O15013 1369 aa17■□□□□ 0.31
SF1-201ENST00000227503 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
SF1-201ENST00000227503 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
SF1-201ENST00000227503 FOXO3O43524 673 aa16.99■□□□□ 0.31
SF1-201ENST00000227503 LTKP29376 864 aa16.99■□□□□ 0.31
SF1-201ENST00000227503 GIMAP6Q6P9H5 292 aa16.99■□□□□ 0.31
SF1-201ENST00000227503 CASC1Q6TDU7 716 aa16.99■□□□□ 0.31
SF1-201ENST00000227503 SYAP1Q96A49 352 aaPredicted RBP16.99■□□□□ 0.31
SF1-201ENST00000227503 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
SF1-201ENST00000227503 ERC2O15083 957 aa16.99■□□□□ 0.31
SF1-201ENST00000227503 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
SF1-201ENST00000227503 SPTLC3Q9NUV7 552 aa16.98■□□□□ 0.31
SF1-201ENST00000227503 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
SF1-201ENST00000227503 REC8O95072 547 aa16.98■□□□□ 0.31
SF1-201ENST00000227503 G2E3Q7L622 706 aa16.98■□□□□ 0.31
SF1-201ENST00000227503 SOX12O15370 315 aa16.97■□□□□ 0.31
SF1-201ENST00000227503 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
SF1-201ENST00000227503 KDRP35968 1356 aa16.96■□□□□ 0.31
SF1-201ENST00000227503 FIBPO43427 364 aa16.96■□□□□ 0.31
SF1-201ENST00000227503 PLCD3Q8N3E9 789 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 KIAA1524Q8TCG1 905 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 F6X3S4 739 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 ANO2Q9NQ90 1003 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 CHMP3Q9Y3E7 222 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
SF1-201ENST00000227503 TTC21AQ8NDW8 1320 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 KDM4AO75164 1064 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 ANKRD7Q92527 254 aa16.95■□□□□ 0.3
SF1-201ENST00000227503 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
SF1-201ENST00000227503 NAP1L2Q9ULW6 460 aaPredicted RBP16.95■□□□□ 0.3
SF1-201ENST00000227503 SBNO1A3KN83 1393 aa16.94■□□□□ 0.3
SF1-201ENST00000227503 NCBP1Q09161 790 aaKnown RBP16.94■□□□□ 0.3
SF1-201ENST00000227503 FLT4P35916 1363 aa16.94■□□□□ 0.3
SF1-201ENST00000227503 FMN2Q9NZ56 1722 aa16.94■□□□□ 0.3
SF1-201ENST00000227503 HMMRO75330 724 aa16.94■□□□□ 0.3
SF1-201ENST00000227503 PHF14O94880 888 aa16.94■□□□□ 0.3
SF1-201ENST00000227503 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
SF1-201ENST00000227503 CHAF1AQ13111 956 aaPredicted RBP16.94■□□□□ 0.3
SF1-201ENST00000227503 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
SF1-201ENST00000227503 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
SF1-201ENST00000227503 PTGS1P23219 599 aa16.93■□□□□ 0.3
SF1-201ENST00000227503 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
SF1-201ENST00000227503 LRMPQ12912 555 aa16.93■□□□□ 0.3
SF1-201ENST00000227503 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
SF1-201ENST00000227503 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
SF1-201ENST00000227503 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
SF1-201ENST00000227503 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
SF1-201ENST00000227503 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
SF1-201ENST00000227503 EYA1Q99502 592 aa16.92■□□□□ 0.3
SF1-201ENST00000227503 PDE1AP54750 535 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
SF1-201ENST00000227503 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
SF1-201ENST00000227503 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 CUL4AQ13619 759 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 IL25Q9H293 177 aa16.91■□□□□ 0.3
SF1-201ENST00000227503 ERICH4A6NGS2 130 aa16.9■□□□□ 0.3
SF1-201ENST00000227503 MX1P20591 662 aa16.9■□□□□ 0.3
SF1-201ENST00000227503 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
SF1-201ENST00000227503 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
SF1-201ENST00000227503 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
SF1-201ENST00000227503 GNAI2P04899 355 aa16.9■□□□□ 0.3
SF1-201ENST00000227503 KCNJ4P48050 445 aa16.89■□□□□ 0.29
SF1-201ENST00000227503 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
SF1-201ENST00000227503 NRBP1Q9UHY1 535 aa16.89■□□□□ 0.29
SF1-201ENST00000227503 AMPHP49418 695 aa16.88■□□□□ 0.29
SF1-201ENST00000227503 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
SF1-201ENST00000227503 CTIFO43310 598 aaKnown RBP16.88■□□□□ 0.29
SF1-201ENST00000227503 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
SF1-201ENST00000227503 ZNF592Q92610 1267 aa16.88■□□□□ 0.29
SF1-201ENST00000227503 ESYT1Q9BSJ8 1104 aa16.88■□□□□ 0.29
SF1-201ENST00000227503 ST7Q9NRC1 585 aa16.88■□□□□ 0.29
SF1-201ENST00000227503 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
SF1-201ENST00000227503 UNC5CLQ8IV45 518 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
SF1-201ENST00000227503 CPA1P15085 419 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 FLIIQ13045 1269 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 CAMK4Q16566 473 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
SF1-201ENST00000227503 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 OGFRQ9NZT2 677 aa16.87■□□□□ 0.29
SF1-201ENST00000227503 WDR33Q9C0J8 1336 aaKnown RBP16.86■□□□□ 0.29
SF1-201ENST00000227503 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
SF1-201ENST00000227503 SLFN14P0C7P3 912 aa16.86■□□□□ 0.29
SF1-201ENST00000227503 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
SF1-201ENST00000227503 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
SF1-201ENST00000227503 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
SF1-201ENST00000227503 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
SF1-201ENST00000227503 CCDC186Q7Z3E2 898 aa16.85■□□□□ 0.29
SF1-201ENST00000227503 LUZP1Q86V48 1076 aa16.85■□□□□ 0.29
SF1-201ENST00000227503 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms