RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 MROH1Q8NDA8 1641 aa16.95■□□□□ 0.3
SHPK-201ENST00000225519 HSPA4P34932 840 aa16.95■□□□□ 0.3
SHPK-201ENST00000225519 RPAP1Q9BWH6 1393 aaPredicted RBP16.94■□□□□ 0.3
SHPK-201ENST00000225519 KCNJ4P48050 445 aa16.94■□□□□ 0.3
SHPK-201ENST00000225519 WAPLQ7Z5K2 1190 aa16.94■□□□□ 0.3
SHPK-201ENST00000225519 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
SHPK-201ENST00000225519 PPLO60437 1756 aa16.94■□□□□ 0.3
SHPK-201ENST00000225519 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
SHPK-201ENST00000225519 CTIFO43310 598 aaKnown RBP16.94■□□□□ 0.3
SHPK-201ENST00000225519 NAA30Q147X3 362 aaPredicted RBP16.94■□□□□ 0.3
SHPK-201ENST00000225519 CHL1O00533 1208 aa16.93■□□□□ 0.3
SHPK-201ENST00000225519 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
SHPK-201ENST00000225519 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
SHPK-201ENST00000225519 CAMSAP1Q5T5Y3 1602 aa16.93■□□□□ 0.3
SHPK-201ENST00000225519 TYRO3Q06418 890 aa16.93■□□□□ 0.3
SHPK-201ENST00000225519 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
SHPK-201ENST00000225519 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
SHPK-201ENST00000225519 KRT85P78386 507 aa16.93■□□□□ 0.3
SHPK-201ENST00000225519 ARHGEF28Q8N1W1 1705 aaKnown RBP16.92■□□□□ 0.3
SHPK-201ENST00000225519 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
SHPK-201ENST00000225519 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
SHPK-201ENST00000225519 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
SHPK-201ENST00000225519 GABPB1Q06547 395 aaPredicted RBP16.92■□□□□ 0.3
SHPK-201ENST00000225519 ANO6Q4KMQ2 910 aa16.92■□□□□ 0.3
SHPK-201ENST00000225519 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
SHPK-201ENST00000225519 NRBP1Q9UHY1 535 aa16.92■□□□□ 0.3
SHPK-201ENST00000225519 ABCC3O15438 1527 aa16.92■□□□□ 0.3
SHPK-201ENST00000225519 CCDC66A2RUB6 948 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
SHPK-201ENST00000225519 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
SHPK-201ENST00000225519 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■□□□ 12.2
SHPK-201ENST00000225519 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
SHPK-201ENST00000225519 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 ERICH4A6NGS2 130 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
SHPK-201ENST00000225519 FUCA2Q9BTY2 467 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 IL25Q9H293 177 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 NPHP1O15259 732 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 CTNNA3Q9UI47 895 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 PAXBP1Q9Y5B6 917 aa16.91■□□□□ 0.3
SHPK-201ENST00000225519 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
SHPK-201ENST00000225519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
SHPK-201ENST00000225519 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
SHPK-201ENST00000225519 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
SHPK-201ENST00000225519 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
SHPK-201ENST00000225519 BICD2Q8TD16 824 aa16.9■□□□□ 0.3
SHPK-201ENST00000225519 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
SHPK-201ENST00000225519 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.29
SHPK-201ENST00000225519 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 YEATS2Q9ULM3 1422 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 RAD50Q92878 1312 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 KRT222Q8N1A0 295 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 NECAB1Q8N987 351 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 DACT1Q9NYF0 836 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
SHPK-201ENST00000225519 CYP46A1Q9Y6A2 500 aa16.88■□□□□ 0.29
SHPK-201ENST00000225519 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
SHPK-201ENST00000225519 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
SHPK-201ENST00000225519 LARGE1O95461 756 aa16.88■□□□□ 0.29
SHPK-201ENST00000225519 LIG1P18858 919 aa16.88■□□□□ 0.29
SHPK-201ENST00000225519 TFIP11Q9UBB9 837 aaKnown RBP16.88■□□□□ 0.29
SHPK-201ENST00000225519 SGSM2O43147 1006 aa16.88■□□□□ 0.29
SHPK-201ENST00000225519 ZSCAN25Q6NSZ9 544 aa16.88■□□□□ 0.29
SHPK-201ENST00000225519 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
SHPK-201ENST00000225519 SLC52A1Q9NWF4 448 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 DDX41Q9UJV9 622 aaKnown RBP16.87■□□□□ 0.29
SHPK-201ENST00000225519 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 LMTK2Q8IWU2 1503 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 ZNF165P49910 485 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
SHPK-201ENST00000225519 STAP2Q9UGK3 403 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SHPK-201ENST00000225519 ZSCAN31Q96LW9 406 aaPredicted RBP16.87■□□□□ 0.29
SHPK-201ENST00000225519 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 ZNF75DP51815 510 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 FLIIQ13045 1269 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 SPATA32Q96LK8 384 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 PTPN14Q15678 1187 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
SHPK-201ENST00000225519 GTF2E1P29083 439 aaPredicted RBP16.86■□□□□ 0.29
SHPK-201ENST00000225519 RUFY2Q8WXA3 655 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 DNAJC25Q9H1X3 360 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 SALL3Q9BXA9 1300 aa16.86■□□□□ 0.29
SHPK-201ENST00000225519 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
SHPK-201ENST00000225519 SYCP1Q15431 976 aa16.85■□□□□ 0.29
SHPK-201ENST00000225519 TTC14Q96N46 770 aa16.85■□□□□ 0.29
SHPK-201ENST00000225519 SH2B1Q9NRF2 756 aaPredicted RBP16.85■□□□□ 0.29
SHPK-201ENST00000225519 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
SHPK-201ENST00000225519 FILIP1Q7Z7B0 1213 aa16.85■□□□□ 0.29
SHPK-201ENST00000225519 ZNF397Q8NF99 534 aaPredicted RBP16.85■□□□□ 0.29
SHPK-201ENST00000225519 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
SHPK-201ENST00000225519 KIF18AQ8NI77 898 aa16.84■□□□□ 0.29
SHPK-201ENST00000225519 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
SHPK-201ENST00000225519 BECN2A8MW95 431 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms