RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CWC22Q9HCG8 908 aaKnown RBP17.81■□□□□ 0.44
CNOT3-201ENST00000221232 CYP2E1P05181 493 aaPredicted RBP17.81■□□□□ 0.44
CNOT3-201ENST00000221232 PA2G4Q9UQ80 394 aaKnown RBP17.81■□□□□ 0.44
CNOT3-201ENST00000221232 SLIT1O75093 1534 aa17.81■□□□□ 0.44
CNOT3-201ENST00000221232 NSFL1CQ9UNZ2 370 aaKnown RBP17.81■□□□□ 0.44
CNOT3-201ENST00000221232 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
CNOT3-201ENST00000221232 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
CNOT3-201ENST00000221232 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
CNOT3-201ENST00000221232 GCP02774 474 aa17.8■□□□□ 0.44
CNOT3-201ENST00000221232 SPG7Q9UQ90 795 aa17.8■□□□□ 0.44
CNOT3-201ENST00000221232 PTMSP20962 102 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 ZC3H6P61129 1189 aaKnown RBP17.79■□□□□ 0.44
CNOT3-201ENST00000221232 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
CNOT3-201ENST00000221232 C9orf78Q9NZ63 289 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-201ENST00000221232 MAP3K2Q9Y2U5 619 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-201ENST00000221232 PLEKHO1Q53GL0 409 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-201ENST00000221232 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 GDPD2Q9HCC8 539 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 ERBB4Q15303 1308 aa17.79■□□□□ 0.44
CNOT3-201ENST00000221232 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
CNOT3-201ENST00000221232 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
CNOT3-201ENST00000221232 CPA1P15085 419 aa17.78■□□□□ 0.44
CNOT3-201ENST00000221232 ZSCAN23Q3MJ62 389 aa17.78■□□□□ 0.44
CNOT3-201ENST00000221232 FMN2Q9NZ56 1722 aa17.78■□□□□ 0.44
CNOT3-201ENST00000221232 CLEC17AQ6ZS10 378 aa17.77■□□□□ 0.44
CNOT3-201ENST00000221232 SLC39A6Q13433 755 aa17.77■□□□□ 0.44
CNOT3-201ENST00000221232 ANKRD24Q8TF21 1146 aa17.77■□□□□ 0.44
CNOT3-201ENST00000221232 PI4K2BQ8TCG2 481 aa17.77■□□□□ 0.43
CNOT3-201ENST00000221232 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.43
CNOT3-201ENST00000221232 ANKARQ7Z5J8 1434 aa17.76■□□□□ 0.43
CNOT3-201ENST00000221232 RNMTO43148 476 aaKnown RBP17.76■□□□□ 0.43
CNOT3-201ENST00000221232 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
CNOT3-201ENST00000221232 KIF1BPQ96EK5 621 aa17.76■□□□□ 0.43
CNOT3-201ENST00000221232 PIP4K2AP48426 406 aaPredicted RBP17.76■□□□□ 0.43
CNOT3-201ENST00000221232 POLA2Q14181 598 aa17.76■□□□□ 0.43
CNOT3-201ENST00000221232 JARID2Q92833 1246 aaPredicted RBP17.76■□□□□ 0.43
CNOT3-201ENST00000221232 PRIM1P49642 420 aaKnown RBP17.75■□□□□ 0.43
CNOT3-201ENST00000221232 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
CNOT3-201ENST00000221232 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
CNOT3-201ENST00000221232 ESPNB1AK53 854 aa17.75■□□□□ 0.43
CNOT3-201ENST00000221232 KCNH5Q8NCM2 988 aa17.75■□□□□ 0.43
CNOT3-201ENST00000221232 CEMIPQ8WUJ3 1361 aa17.74■□□□□ 0.43
CNOT3-201ENST00000221232 RAB11FIP3O75154 756 aa17.74■□□□□ 0.43
CNOT3-201ENST00000221232 MYL6BP14649 208 aa17.74■□□□□ 0.43
CNOT3-201ENST00000221232 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
CNOT3-201ENST00000221232 SIL1Q9H173 461 aa17.74■□□□□ 0.43
CNOT3-201ENST00000221232 RBSNQ9H1K0 784 aa17.74■□□□□ 0.43
CNOT3-201ENST00000221232 SYCE3A1L190 88 aa17.73■□□□□ 0.43
CNOT3-201ENST00000221232 DBF4Q9UBU7 674 aaPredicted RBP17.73■□□□□ 0.43
CNOT3-201ENST00000221232 ISY1Q9ULR0 285 aaKnown RBP17.73■□□□□ 0.43
CNOT3-201ENST00000221232 ADCY9O60503 1353 aa17.73■□□□□ 0.43
CNOT3-201ENST00000221232 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
CNOT3-201ENST00000221232 KIAA1211Q6ZU35 1233 aa17.73■□□□□ 0.43
CNOT3-201ENST00000221232 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
CNOT3-201ENST00000221232 TMEM63CQ9P1W3 806 aa17.73■□□□□ 0.43
CNOT3-201ENST00000221232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
CNOT3-201ENST00000221232 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
CNOT3-201ENST00000221232 RNF214Q8ND24 703 aa17.72■□□□□ 0.43
CNOT3-201ENST00000221232 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
CNOT3-201ENST00000221232 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
CNOT3-201ENST00000221232 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
CNOT3-201ENST00000221232 SGSM2O43147 1006 aa17.71■□□□□ 0.43
CNOT3-201ENST00000221232 HSPA4P34932 840 aa17.71■□□□□ 0.43
CNOT3-201ENST00000221232 CLASRPQ8N2M8 674 aaKnown RBP17.71■□□□□ 0.43
CNOT3-201ENST00000221232 SNX14Q9Y5W7 946 aa17.71■□□□□ 0.43
CNOT3-201ENST00000221232 KRT28Q7Z3Y7 464 aa17.7■□□□□ 0.42
CNOT3-201ENST00000221232 NLRP2Q9NX02 1062 aa17.7■□□□□ 0.42
CNOT3-201ENST00000221232 IFIT2P09913 472 aaKnown RBP17.7■□□□□ 0.42
CNOT3-201ENST00000221232 MCM2P49736 904 aa17.7■□□□□ 0.42
CNOT3-201ENST00000221232 AACSQ86V21 672 aa17.7■□□□□ 0.42
CNOT3-201ENST00000221232 DIAPH3Q9NSV4 1193 aa17.7■□□□□ 0.42
CNOT3-201ENST00000221232 CLCN1P35523 988 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 BRD1O95696 1058 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 ANAPC15P60006 121 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 PTH1RQ03431 593 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 CUL4AQ13619 759 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 AMOTQ4VCS5 1084 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
CNOT3-201ENST00000221232 CABLES1Q8TDN4 633 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
CNOT3-201ENST00000221232 KSR2Q6VAB6 950 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
CNOT3-201ENST00000221232 AK2P54819 239 aa17.68■□□□□ 0.42
CNOT3-201ENST00000221232 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
CNOT3-201ENST00000221232 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
CNOT3-201ENST00000221232 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
CNOT3-201ENST00000221232 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
CNOT3-201ENST00000221232 CASTP20810 708 aaKnown RBP17.68■□□□□ 0.42
CNOT3-201ENST00000221232 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
CNOT3-201ENST00000221232 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
CNOT3-201ENST00000221232 PXDNQ92626 1479 aa17.68■□□□□ 0.42
CNOT3-201ENST00000221232 ZNF445P59923 1031 aa17.67■□□□□ 0.42
CNOT3-201ENST00000221232 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
CNOT3-201ENST00000221232 BICC1Q9H694 974 aaKnown RBP17.67■□□□□ 0.42
CNOT3-201ENST00000221232 FAM208AQ9UK61 1670 aaKnown RBP17.67■□□□□ 0.42
CNOT3-201ENST00000221232 ADCK5Q3MIX3 580 aa17.66■□□□□ 0.42
CNOT3-201ENST00000221232 GLRX3O76003 335 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms