RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 C5P01031 1676 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 FAM182BQ5T319 152 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 CHMP4AQ9BY43 222 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 CHPF2Q9P2E5 772 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 USP16Q9Y5T5 823 aa27.96■■■□□ 2.07
HOXC8-201ENST00000040584 KCNQ2O43526 872 aa27.95■■■□□ 2.07
HOXC8-201ENST00000040584 RBM6P78332 1123 aaKnown RBP27.94■■■□□ 2.06
HOXC8-201ENST00000040584 ANXA1P04083 346 aa27.93■■■□□ 2.06
HOXC8-201ENST00000040584 ANP32AP39687 249 aaKnown RBP27.93■■■□□ 2.06
HOXC8-201ENST00000040584 API5Q9BZZ5 524 aaKnown RBP27.93■■■□□ 2.06
HOXC8-201ENST00000040584 DBF4Q9UBU7 674 aaPredicted RBP27.93■■■□□ 2.06
HOXC8-201ENST00000040584 PTPRCP08575 1304 aa27.93■■■□□ 2.06
HOXC8-201ENST00000040584 FLIIQ13045 1269 aa27.92■■■□□ 2.06
HOXC8-201ENST00000040584 PHAXQ9H814 394 aaKnown RBP27.92■■■□□ 2.06
HOXC8-201ENST00000040584 TMEM57Q8N5G2 664 aa27.91■■■□□ 2.06
HOXC8-201ENST00000040584 RBM42Q9BTD8 480 aaKnown RBP27.91■■■□□ 2.06
HOXC8-201ENST00000040584 CACNA1FO60840 1977 aa27.91■■■□□ 2.06
HOXC8-201ENST00000040584 PROSER3Q2NL68 480 aa27.91■■■□□ 2.06
HOXC8-201ENST00000040584 MVPQ14764 893 aaKnown RBP27.9■■■□□ 2.06
HOXC8-201ENST00000040584 RGS17Q9UGC6 210 aaPredicted RBP27.9■■■□□ 2.06
HOXC8-201ENST00000040584 RGS12O14924 1447 aa27.9■■■□□ 2.06
HOXC8-201ENST00000040584 ABCC4O15439 1325 aa27.89■■■□□ 2.05
HOXC8-201ENST00000040584 PDIA6Q15084 440 aa27.89■■■□□ 2.05
HOXC8-201ENST00000040584 FKBP5Q13451 457 aaPredicted RBP27.88■■■□□ 2.05
HOXC8-201ENST00000040584 ITPRIPQ8IWB1 547 aa27.88■■■□□ 2.05
HOXC8-201ENST00000040584 DDX21Q9NR30 783 aaKnown RBP eCLIP27.88■■■□□ 2.05
HOXC8-201ENST00000040584 PTF1AQ7RTS3 328 aa27.87■■■□□ 2.05
HOXC8-201ENST00000040584 F6X3S4 739 aa27.86■■■□□ 2.05
HOXC8-201ENST00000040584 PIP4K2AP48426 406 aaPredicted RBP27.86■■■□□ 2.05
HOXC8-201ENST00000040584 VSIG10Q8N0Z9 540 aa27.86■■■□□ 2.05
HOXC8-201ENST00000040584 SLC4A9Q96Q91 983 aa27.86■■■□□ 2.05
HOXC8-201ENST00000040584 LAMB4A4D0S4 1761 aa27.86■■■□□ 2.05
HOXC8-201ENST00000040584 MYL6BP14649 208 aa27.85■■■□□ 2.05
HOXC8-201ENST00000040584 RXRBP28702 533 aa27.85■■■□□ 2.05
HOXC8-201ENST00000040584 HYPKQ9NX55 129 aa27.85■■■□□ 2.05
HOXC8-201ENST00000040584 NOP58Q9Y2X3 529 aaKnown RBP27.85■■■□□ 2.05
HOXC8-201ENST00000040584 BRWD3Q6RI45 1802 aa27.85■■■□□ 2.05
HOXC8-201ENST00000040584 KRT27Q7Z3Y8 459 aa27.85■■■□□ 2.05
HOXC8-201ENST00000040584 DNAJC10Q8IXB1 793 aa27.85■■■□□ 2.05
HOXC8-201ENST00000040584 IPO9Q96P70 1041 aaKnown RBP27.84■■■□□ 2.05
HOXC8-201ENST00000040584 AAMPQ13685 434 aa27.83■■■□□ 2.05
HOXC8-201ENST00000040584 A1BGP04217 495 aa27.82■■■□□ 2.04
HOXC8-201ENST00000040584 POTEAQ6S8J7 498 aa27.82■■■□□ 2.04
HOXC8-201ENST00000040584 TEX13AQ9BXU3 409 aaPredicted RBP27.82■■■□□ 2.04
HOXC8-201ENST00000040584 DDX19BQ9UMR2 479 aa27.82■■■□□ 2.04
HOXC8-201ENST00000040584 SLC4A10Q6U841 1118 aa27.81■■■□□ 2.04
HOXC8-201ENST00000040584 PALLDQ8WX93 1383 aa27.81■■■□□ 2.04
HOXC8-201ENST00000040584 NBPF26B4DH59 902 aa27.81■■■□□ 2.04
HOXC8-201ENST00000040584 NBPF14Q5TI25 921 aa27.81■■■□□ 2.04
HOXC8-201ENST00000040584 NBPF10Q6P3W6 841 aaKnown RBP27.81■■■□□ 2.04
HOXC8-201ENST00000040584 NBPF15Q8N660 670 aa27.81■■■□□ 2.04
HOXC8-201ENST00000040584 SMARCC1Q92922 1105 aaPredicted RBP27.81■■■□□ 2.04
HOXC8-201ENST00000040584 AIMP1Q12904 312 aaKnown RBP27.8■■■□□ 2.04
HOXC8-201ENST00000040584 LRP10Q7Z4F1 713 aa27.8■■■□□ 2.04
HOXC8-201ENST00000040584 NHSQ6T4R5 1651 aa27.8■■■□□ 2.04
HOXC8-201ENST00000040584 INTS3Q68E01 1043 aaKnown RBP27.79■■■□□ 2.04
HOXC8-201ENST00000040584 LOC102724428A0A0B4J2F2 783 aa27.78■■■□□ 2.04
HOXC8-201ENST00000040584 SIK1P57059 783 aa27.78■■■□□ 2.04
HOXC8-201ENST00000040584 ERBB4Q15303 1308 aa27.78■■■□□ 2.04
HOXC8-201ENST00000040584 PI4KAP2A4QPH2 592 aa27.78■■■□□ 2.04
HOXC8-201ENST00000040584 STARD3NLO95772 234 aa27.78■■■□□ 2.04
HOXC8-201ENST00000040584 PI4KAP1Q8N8J0 262 aa27.78■■■□□ 2.04
HOXC8-201ENST00000040584 SBF2Q86WG5 1849 aa27.77■■■□□ 2.04
HOXC8-201ENST00000040584 FAM196AQ6ZSG2 479 aa27.77■■■□□ 2.04
HOXC8-201ENST00000040584 XAGE3Q8WTP9 111 aa27.77■■■□□ 2.04
HOXC8-201ENST00000040584 ATP6V1AP38606 617 aa27.76■■■□□ 2.04
HOXC8-201ENST00000040584 COPS6Q7L5N1 327 aa27.76■■■□□ 2.04
HOXC8-201ENST00000040584 BTAF1O14981 1849 aa27.76■■■□□ 2.03
HOXC8-201ENST00000040584 CYP19A1P11511 503 aaPredicted RBP27.76■■■□□ 2.03
HOXC8-201ENST00000040584 ZBTB7BO15156 539 aaPredicted RBP27.75■■■□□ 2.03
HOXC8-201ENST00000040584 PDE4AP27815 886 aa27.75■■■□□ 2.03
HOXC8-201ENST00000040584 ADCY9O60503 1353 aa27.75■■■□□ 2.03
HOXC8-201ENST00000040584 TJP1Q07157 1748 aa27.74■■■□□ 2.03
HOXC8-201ENST00000040584 CENPQQ7L2Z9 268 aaPredicted RBP27.74■■■□□ 2.03
HOXC8-201ENST00000040584 EP400Q96L91 3159 aa27.74■■■□□ 2.03
HOXC8-201ENST00000040584 CCT4P50991 539 aaKnown RBP27.74■■■□□ 2.03
HOXC8-201ENST00000040584 KSR2Q6VAB6 950 aa27.74■■■□□ 2.03
HOXC8-201ENST00000040584 BACH2Q9BYV9 841 aa27.74■■■□□ 2.03
HOXC8-201ENST00000040584 ZBTB40Q9NUA8 1239 aa27.74■■■□□ 2.03
HOXC8-201ENST00000040584 DNAAF4Q8WXU2 420 aa27.73■■■□□ 2.03
HOXC8-201ENST00000040584 ZBTB47Q9UFB7 747 aaPredicted RBP27.73■■■□□ 2.03
HOXC8-201ENST00000040584 MAP3K2Q9Y2U5 619 aa27.73■■■□□ 2.03
HOXC8-201ENST00000040584 DDX58O95786 925 aaKnown RBP27.72■■■□□ 2.03
HOXC8-201ENST00000040584 ITPK1Q13572 414 aa27.72■■■□□ 2.03
HOXC8-201ENST00000040584 BCL11BQ9C0K0 894 aaPredicted RBP27.72■■■□□ 2.03
HOXC8-201ENST00000040584 CHMP4BQ9H444 224 aaKnown RBP27.7■■■□□ 2.03
HOXC8-201ENST00000040584 PXDNLA1KZ92 1463 aa27.7■■■□□ 2.02
HOXC8-201ENST00000040584 PCDHB15Q9Y5E8 787 aa27.7■■■□□ 2.02
HOXC8-201ENST00000040584 KCNQ4P56696 695 aa27.69■■■□□ 2.02
HOXC8-201ENST00000040584 RIC3Q7Z5B4 369 aa27.69■■■□□ 2.02
HOXC8-201ENST00000040584 KDM2BQ8NHM5 1336 aa27.69■■■□□ 2.02
HOXC8-201ENST00000040584 TRIM37O94972 964 aa27.68■■■□□ 2.02
HOXC8-201ENST00000040584 ANKRD13DQ6ZTN6 518 aa27.68■■■□□ 2.02
HOXC8-201ENST00000040584 ZNF330Q9Y3S2 320 aaPredicted RBP27.68■■■□□ 2.02
HOXC8-201ENST00000040584 BEND3Q5T5X7 828 aa27.68■■■□□ 2.02
HOXC8-201ENST00000040584 TTLL7Q6ZT98 887 aa27.68■■■□□ 2.02
HOXC8-201ENST00000040584 ZBTB1Q9Y2K1 713 aa27.68■■■□□ 2.02
HOXC8-201ENST00000040584 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
HOXC8-201ENST00000040584 MEIS3Q99687 375 aa27.66■■■□□ 2.02
HOXC8-201ENST00000040584 SRCIN1Q9C0H9 1055 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms