RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Sytl4Q9R0Q1 673 aa22.29■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Erbb4Q61527 1308 aa22.29■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Gsdma3Q5Y4Y6 464 aa22.28■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Rrp12Q6P5B0 1295 aaKnown RBP22.28■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Amotl1Q9D4H4 968 aa22.28■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Ccdc7Q9D541 371 aa22.28■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Rims2Q9EQZ7 1530 aa22.28■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Pof1bQ8K4L4 587 aa22.27■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Dnajc10Q9DC23 793 aa22.27■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Sipa1l2Q80TE4 1722 aa22.27■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Zfp804bA0A0G2JGH6 1343 aa22.27■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Rad50P70388 1312 aa22.27■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Nfat5Q9WV30 1534 aa22.27■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Zscan25B2RX31 543 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 St18Q80TY4 1045 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Brf1Q8CFK2 676 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Edc3Q8K2D3 508 aaKnown RBP22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 TatQ8QZR1 454 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Noc3lQ8VI84 807 aaKnown RBP22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Robo1O89026 1612 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 DpydQ8CHR6 1025 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Rufy3Q9D394 469 aa22.26■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Btbd11Q6GQW0 1109 aa22.25■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Fam228bQ497Q6 232 aa22.24■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 PtmsQ9D0J8 101 aaKnown RBP22.24■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Col1a2Q01149 1372 aa22.24■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Gjb2Q00977 226 aa22.24■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Echdc1Q9D9V3 322 aa22.24■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Igfbp6P47880 238 aa22.24■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Map3k2Q61083 619 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Rad17Q6NXW6 688 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Bms1Q6PGF5 1284 aaKnown RBP22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 KinQ8K339 391 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Gripap1Q8VD04 806 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Rcan3Q9JKK0 239 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Ddrgk1Q80WW9 315 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Ppp1r37Q8BKR5 712 aa22.23■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Alpk3Q924C5 1678 aa22.22■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Aox2Q5SGK3 1345 aa22.22■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 EappQ5BU09 281 aa22.22■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Kif4P33174 1231 aa22.22■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Cct4P80315 539 aaKnown RBP22.22■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Atp10bB1AWN4 1474 aa22.22■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Nid2O88322 1403 aa22.21■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Atp6v1dP57746 247 aa22.21■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Ccdc155Q80VJ8 648 aa22.21■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Atg3Q9CPX6 314 aa22.21■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Chd1lQ9CXF7 900 aa22.21■■□□□ 1.15
Ccdc3-201ENSMUST00000027988 Ets1P27577 440 aa22.2■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Add2Q9QYB8 725 aa22.2■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Pnma3Q8JZW8 466 aa22.2■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Jarid2Q62315 1234 aa22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Ccar2Q8VDP4 922 aaKnown RBP22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Taf5lQ91WQ5 589 aa22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Cdca7lQ922M5 438 aa22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Strn4P58404 760 aa22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Ints3Q7TPD0 1041 aaKnown RBP22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Kdm4aQ8BW72 1064 aa22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Tceal9Q9DD24 104 aa22.19■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Kdm6aO70546 1401 aa22.18■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Brpf1B2RRD7 1212 aa22.18■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Babam1Q3UI43 333 aa22.18■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Tmem2Q5FWI3 1383 aa22.18■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Pknox2Q8BG99 474 aa22.18■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 BcorQ8CGN4 1759 aa22.18■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Hspa2P17156 633 aa22.17■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Ddx19aQ61655 478 aaKnown RBP22.17■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Zbtb3Q91X45 518 aa22.17■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Smarce1O54941 411 aaKnown RBP22.17■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Mknk2Q8CDB0 459 aa22.17■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 GckrQ91X44 587 aa22.17■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Clcn1Q64347 994 aa22.16■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Tti2Q8BGV4 512 aa22.16■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Rtn4Q99P72 1162 aaKnown RBP22.16■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Ncoa4Q5U4H9 625 aa22.16■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Abcc4E9Q236 1325 aa22.16■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Top1mtQ8R4U6 593 aa22.15■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Flt4P35917 1363 aa22.15■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Abcc12Q80WJ6 1366 aa22.15■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Ifit2Q64112 472 aa22.15■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Mrpl50Q8VDT9 159 aaKnown RBP22.15■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Bicc1Q99MQ1 977 aaKnown RBP22.15■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Syt1P46096 421 aa22.14■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Pkp1P97350 728 aaKnown RBP22.14■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 4930504O13RikQ8C5Z9 145 aa22.14■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Fez1Q8K0X8 392 aa22.14■■□□□ 1.14
Ccdc3-201ENSMUST00000027988 Tceanc2Q8R2M0 207 aa22.14■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Ripk4Q9ERK0 786 aa22.14■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Ppfia1B2RXQ2 1266 aa22.14■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Il1rapl2Q9ERS6 686 aa22.14■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Gzf1Q4VBD9 706 aa22.13■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Rbm10Q99KG3 930 aaKnown RBP22.13■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Stx6Q9JKK1 255 aa22.13■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 MyclP10166 368 aa22.13■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Zbtb22Q9Z0G7 638 aa22.13■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 SympkQ80X82 1284 aa22.12■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Samm50Q8BGH2 469 aa22.12■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Olfml1Q8BSH2 233 aa22.12■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 Pdia6Q922R8 440 aaKnown RBP22.12■■□□□ 1.13
Ccdc3-201ENSMUST00000027988 TimelessQ9R1X4 1197 aa22.12■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms