RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ambra1A2AH22 1300 aa22.36■■□□□ 1.17
Trim54-201ENSMUST00000013771 Cers3Q1A3B0 383 aa22.36■■□□□ 1.17
Trim54-201ENSMUST00000013771 TefQ9JLC6 301 aa22.36■■□□□ 1.17
Trim54-201ENSMUST00000013771 Q4VA45 678 aa22.35■■□□□ 1.17
Trim54-201ENSMUST00000013771 Gigyf1Q99MR1 1044 aaKnown RBP22.35■■□□□ 1.17
Trim54-201ENSMUST00000013771 Prr29B1ARI9 187 aa22.34■■□□□ 1.17
Trim54-201ENSMUST00000013771 Mex3cQ05A36 652 aaKnown RBP22.34■■□□□ 1.17
Trim54-201ENSMUST00000013771 Esco1Q69Z69 843 aa22.34■■□□□ 1.17
Trim54-201ENSMUST00000013771 Myo5bP21271 1818 aa22.34■■□□□ 1.17
Trim54-201ENSMUST00000013771 Gja5Q01231 358 aa22.33■■□□□ 1.17
Trim54-201ENSMUST00000013771 D830030K20RikE9PYQ5 218 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Gm3043K7N693 218 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Gm16440K7N6G6 218 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Gm2244L7N2A3 218 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Gm3278L7N2D2 218 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Gm8271L7N2E2 218 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Arid3aQ62431 601 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Slf2Q6P9P0 1278 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Cd248Q91V98 765 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Ddx60E9PZQ1 1711 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Col4a5Q63ZW6 1691 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Mapk8ip3Q9ESN9 1337 aa22.32■■□□□ 1.16
Trim54-201ENSMUST00000013771 Snai1Q02085 264 aa22.31■■□□□ 1.16
Trim54-201ENSMUST00000013771 Col4a1P02463 1669 aa22.31■■□□□ 1.16
Trim54-201ENSMUST00000013771 Iqsec3Q3TES0 1195 aa22.31■■□□□ 1.16
Trim54-201ENSMUST00000013771 Gjd4Q8BSD4 364 aa22.31■■□□□ 1.16
Trim54-201ENSMUST00000013771 Spire2Q8K1S6 718 aa22.31■■□□□ 1.16
Trim54-201ENSMUST00000013771 Lama4P97927 1816 aa22.3■■□□□ 1.16
Trim54-201ENSMUST00000013771 Prkab2Q6PAM0 271 aa22.3■■□□□ 1.16
Trim54-201ENSMUST00000013771 Golgb1E9PVZ8 3238 aa22.3■■□□□ 1.16
Trim54-201ENSMUST00000013771 Pdzph1Q8BGR1 1238 aa22.29■■□□□ 1.16
Trim54-201ENSMUST00000013771 Anp32bQ9EST5 272 aaKnown RBP22.29■■□□□ 1.16
Trim54-201ENSMUST00000013771 Prim1P20664 417 aa22.28■■□□□ 1.16
Trim54-201ENSMUST00000013771 XpcP51612 930 aa22.28■■□□□ 1.16
Trim54-201ENSMUST00000013771 Nop58Q6DFW4 536 aaKnown RBP22.28■■□□□ 1.16
Trim54-201ENSMUST00000013771 Ggnbp2Q5SV77 696 aa22.27■■□□□ 1.16
Trim54-201ENSMUST00000013771 NgdnQ9DB96 315 aaKnown RBP22.27■■□□□ 1.16
Trim54-201ENSMUST00000013771 Apaf1O88879 1249 aa22.26■■□□□ 1.15
Trim54-201ENSMUST00000013771 Unc5clQ6R653 518 aa22.26■■□□□ 1.15
Trim54-201ENSMUST00000013771 Ptcd1Q8C2E4 695 aaKnown RBP22.26■■□□□ 1.15
Trim54-201ENSMUST00000013771 St5Q924W7 1134 aa22.26■■□□□ 1.15
Trim54-201ENSMUST00000013771 Hoxd11P23813 323 aa22.25■■□□□ 1.15
Trim54-201ENSMUST00000013771 CastP51125 788 aa22.25■■□□□ 1.15
Trim54-201ENSMUST00000013771 Upf1Q9EPU0 1124 aaKnown RBP22.25■■□□□ 1.15
Trim54-201ENSMUST00000013771 Bcl2l13P59017 434 aa22.24■■□□□ 1.15
Trim54-201ENSMUST00000013771 Slc39a6Q8C145 765 aa22.24■■□□□ 1.15
Trim54-201ENSMUST00000013771 Socs7Q8VHQ2 579 aa22.24■■□□□ 1.15
Trim54-201ENSMUST00000013771 Kif13bA0A286YCV9 1847 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 PgfP49764 158 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 Ifit1bl2Q3U687 466 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 SowahdQ8BY98 327 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 Col1a2Q01149 1372 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 Usp19Q3UJD6 1360 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 Atf5O70191 283 aa22.23■■□□□ 1.15
Trim54-201ENSMUST00000013771 CfhP06909 1234 aa22.22■■□□□ 1.15
Trim54-201ENSMUST00000013771 Q7TT23 1179 aa22.22■■□□□ 1.15
Trim54-201ENSMUST00000013771 Tnnt1O88346 262 aa22.21■■□□□ 1.15
Trim54-201ENSMUST00000013771 Pdia6Q922R8 440 aaKnown RBP22.21■■□□□ 1.15
Trim54-201ENSMUST00000013771 Stk32bQ9JJX8 414 aa22.21■■□□□ 1.15
Trim54-201ENSMUST00000013771 Olfr247E9PVJ7 320 aa22.2■■□□□ 1.14
Trim54-201ENSMUST00000013771 Olfr819K7N727 320 aa22.2■■□□□ 1.14
Trim54-201ENSMUST00000013771 Eif4a1P60843 406 aaKnown RBP22.2■■□□□ 1.14
Trim54-201ENSMUST00000013771 Gja3Q64448 417 aa22.2■■□□□ 1.14
Trim54-201ENSMUST00000013771 Pde4bB1AWC9 736 aa22.19■■□□□ 1.14
Trim54-201ENSMUST00000013771 NpcdF8VQB8 469 aa22.19■■□□□ 1.14
Trim54-201ENSMUST00000013771 Cyp2c23E9Q5K4 494 aa22.18■■□□□ 1.14
Trim54-201ENSMUST00000013771 Stxbp5lQ5DQR4 1185 aa22.18■■□□□ 1.14
Trim54-201ENSMUST00000013771 GckrQ91X44 587 aa22.18■■□□□ 1.14
Trim54-201ENSMUST00000013771 Taf7Q9R1C0 341 aa22.18■■□□□ 1.14
Trim54-201ENSMUST00000013771 Stox1B2RQL2 990 aa22.17■■□□□ 1.14
Trim54-201ENSMUST00000013771 CltaO08585 235 aa22.17■■□□□ 1.14
Trim54-201ENSMUST00000013771 Podxl2Q8CAE9 603 aa22.17■■□□□ 1.14
Trim54-201ENSMUST00000013771 Nlrp3Q8R4B8 1033 aa22.17■■□□□ 1.14
Trim54-201ENSMUST00000013771 Mapk8ip1Q9WVI9 707 aa22.17■■□□□ 1.14
Trim54-201ENSMUST00000013771 Col5a2Q3U962 1497 aa22.17■■□□□ 1.14
Trim54-201ENSMUST00000013771 Mrc1Q61830 1456 aa22.16■■□□□ 1.14
Trim54-201ENSMUST00000013771 Fkbp4P30416 458 aa22.15■■□□□ 1.14
Trim54-201ENSMUST00000013771 Znf428Q8C1M2 176 aa22.15■■□□□ 1.14
Trim54-201ENSMUST00000013771 Dbndd1Q9CZ00 160 aa22.15■■□□□ 1.14
Trim54-201ENSMUST00000013771 Pibf1E9Q6K3 756 aa22.14■■□□□ 1.14
Trim54-201ENSMUST00000013771 Rbm46P86049 533 aa22.14■■□□□ 1.14
Trim54-201ENSMUST00000013771 Thrap3Q569Z6 951 aaKnown RBP22.14■■□□□ 1.14
Trim54-201ENSMUST00000013771 VwdeQ6DFV8 926 aa22.14■■□□□ 1.14
Trim54-201ENSMUST00000013771 Soga3Q6NZL0 945 aa22.14■■□□□ 1.14
Trim54-201ENSMUST00000013771 Senp3Q9EP97 568 aaKnown RBP22.14■■□□□ 1.14
Trim54-201ENSMUST00000013771 Col24a1Q30D77 1733 aa22.14■■□□□ 1.13
Trim54-201ENSMUST00000013771 SobpQ0P5V2 864 aa22.14■■□□□ 1.13
Trim54-201ENSMUST00000013771 Zc3h12cQ5DTV4 884 aa22.14■■□□□ 1.13
Trim54-201ENSMUST00000013771 Gimap8Q75N62 688 aa22.14■■□□□ 1.13
Trim54-201ENSMUST00000013771 Rpgrip1lQ8CG73 1264 aa22.14■■□□□ 1.13
Trim54-201ENSMUST00000013771 Uhrf1bp1B2KF50 1429 aa22.14■■□□□ 1.13
Trim54-201ENSMUST00000013771 Cavin4A2AMM0 362 aa22.13■■□□□ 1.13
Trim54-201ENSMUST00000013771 Dctn1O08788 1281 aa22.13■■□□□ 1.13
Trim54-201ENSMUST00000013771 Duox1A2AQ92 1551 aa22.12■■□□□ 1.13
Trim54-201ENSMUST00000013771 Erbb4Q61527 1308 aa22.12■■□□□ 1.13
Trim54-201ENSMUST00000013771 Fhdc1Q3ULZ2 1149 aa22.12■■□□□ 1.13
Trim54-201ENSMUST00000013771 Adam1aQ60813 791 aa22.12■■□□□ 1.13
Trim54-201ENSMUST00000013771 Dpf2Q61103 391 aaKnown RBP22.12■■□□□ 1.13
Trim54-201ENSMUST00000013771 Rbm5Q91YE7 815 aaKnown RBP22.12■■□□□ 1.13
Trim54-201ENSMUST00000013771 Ttc5Q99LG4 440 aa22.12■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms