RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 CFHR1Q03591 330 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 ZFP36L1Q07352 338 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 ILF2Q12905 390 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 NAB1Q13506 487 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 TRA2AQ13595 282 aaKnown RBP eCLIP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 TRIM25Q14258 630 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 GBX1Q14549 363 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 EFTUD2Q15029 972 aaKnown RBP eCLIP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 UAP1Q16222 522 aaPredicted RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 FAM153CQ494X1 144 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 C3orf38Q5JPI3 329 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 GRTP1Q5TC63 336 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 CACHD1Q5VU97 1274 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 WDR74Q6RFH5 385 aaPredicted RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 FAM92BQ6ZTR7 304 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 RAB11FIP2Q7L804 512 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 AMIGO1Q86WK6 493 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 DCUN1D3Q8IWE4 304 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 GSPT2Q8IYD1 628 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 MYO1HQ8N1T3 1032 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 FBXO39Q8N4B4 442 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 RAB42Q8N4Z0 105 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 OR14K1Q8NGZ2 314 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 WDR36Q8NI36 951 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 MAGEC3Q8TD91 643 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 EEF1AKMT1Q8WVE0 214 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 CFHR4Q92496 578 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 RAD51AP1Q96B01 352 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 LINGO1Q96FE5 620 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 LRRC37BQ96QE4 947 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 LMF1Q96S06 567 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 CYTH2Q99418 400 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 CMKLR1Q99788 373 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 ZNF106Q9H2Y7 1883 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 TFB2MQ9H5Q4 396 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 C14orf119Q9NWQ9 140 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 OGFRQ9NZT2 677 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 PRSS50Q9UI38 385 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 MED16Q9Y2X0 877 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 MTO1Q9Y2Z2 717 aaKnown RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 IKBKGQ9Y6K9 419 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 V9GYY5 206 aaPredicted RBP7.82□□□□□ -1.16
TARDBP-224ENST00000621573 NCOR2Q9Y618 2525 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 PIKFYVEQ9Y2I7 2098 aa7.82□□□□□ -1.16
TARDBP-224ENST00000621573 A0A087WUV0 522 aaPredicted RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PIPSLA2A3N6 862 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PABPN1LA6NDY0 278 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 NPEPPSL1A6NEC2 478 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 OR5K3A6NET4 321 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 C2orf74A8MZ97 194 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 BTN3A3O00478 584 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 ZBTB14O43829 449 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 C1orf105O95561 183 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 SYF2O95926 243 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 CATP04040 527 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 LPLP06858 475 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 THRAP10827 490 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 ENPP1P22413 925 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 FDXRP22570 491 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 RBMS1P29558 406 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 CCKBRP32239 447 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 SHMT2P34897 504 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PDX1P52945 283 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PGGT1BP53609 377 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 TAS2R39P59534 338 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 TIAL1Q01085 375 aaKnown RBP eCLIP7.81□□□□□ -1.166e-7■■□□□ 11.7
TARDBP-224ENST00000621573 UBAP2Q5T6F2 1119 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 LRRC8EQ6NSJ5 796 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 NEK10Q6ZWH5 1172 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 TRMT10CQ7L0Y3 403 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PIWIL4Q7Z3Z4 852 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 TAX1BP1Q86VP1 789 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 C2orf73Q8N5S3 287 aaPredicted RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 EIF1ADQ8N9N8 165 aaKnown RBP7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PPP1R14CQ8TAE6 165 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 IL17FQ96PD4 163 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 RBBP8Q99708 897 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 NRTNQ99748 197 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 OLFM1Q99784 485 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 TRIM8Q9BZR9 551 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 ANKZF1Q9H8Y5 726 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 SYTL2Q9HCH5 934 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 EPHA6Q9UF33 1036 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 PISDQ9UG56 409 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 LNPEPQ9UIQ6 1025 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 SATB2Q9UPW6 733 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 ICKQ9UPZ9 632 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 LOXL2Q9Y4K0 774 aa7.81□□□□□ -1.16
TARDBP-224ENST00000621573 EFCAB7A8K855 629 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 ARHGEF33A8MVX0 844 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 ISM1B1AKI9 464 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 POC1B-GALNT4F8VUJ3 575 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 EIF3FO00303 357 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-224ENST00000621573 BTN3A1O00481 513 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 KIF1CO43896 1103 aaKnown RBP7.8□□□□□ -1.16
TARDBP-224ENST00000621573 TNFSF15O95150 251 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 MATN4O95460 622 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 C1QAP02745 245 aa7.8□□□□□ -1.16
TARDBP-224ENST00000621573 C9P02748 559 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms