RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ASCL5Q7RTU5 278 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CACNA2D4Q7Z3S7 1137 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF441Q8N8Z8 693 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRIML1Q8N9V2 468 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TEX19Q8NA77 164 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 STKLD1Q8NE28 680 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 FBXL13Q8NEE6 735 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CSNK2A3Q8NEV1 391 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 OR2AK2Q8NG84 335 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCDC26Q8TAB7 109 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TAS1R2Q8TE23 839 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 HDAC2Q92769 488 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 OTUB2Q96DC9 234 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 GRAMD2BQ96HH9 432 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 WDFY2Q96P53 400 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC22A12Q96S37 553 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CYP2S1Q96SQ9 504 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 KCNK16Q96T55 309 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CMKLR1Q99788 373 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TUBA1CQ9BQE3 449 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 UBXN6Q9BZV1 441 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 DPEP3Q9H4B8 488 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 FBXO44Q9H4M3 255 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 SMYD3Q9H7B4 428 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 ECT2Q9H8V3 914 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 POLR1BQ9H9Y6 1135 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 UBTD1Q9HAC8 227 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 EBF2Q9HAK2 575 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 APOBEC3GQ9HC16 384 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 RANGRFQ9HD47 186 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 OLA1Q9NTK5 396 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 RAB20Q9NX57 234 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 DUS2Q9NX74 493 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCL26Q9Y258 94 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 ADAM18Q9Y3Q7 739 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 LOXL2Q9Y4K0 774 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 DOCK4Q8N1I0 1966 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PCNX2A6NKB5 2137 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 DCHS1Q96JQ0 3298 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 DMXL1Q9Y485 3027 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 TP53BP1Q12888 1972 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CHD5Q8TDI0 1954 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 A0A087X0M5 115 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 A0A1B0GX30 115 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 BICDL2A1A5D9 508 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 IFITM10A6NMD0 228 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CLDN5O00501 218 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 LRP3O75074 770 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC25A12O75746 678 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 BEST1O76090 585 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 IPO7O95373 1038 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 GNA14O95837 355 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 EGFP01133 1207 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 EIF2S1P05198 315 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM200BP0CF97 657 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRIM49P0CI25 452 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRIM49CP0CI26 452 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 EPB41P11171 864 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 S1PR1P21453 382 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CHMP24386 653 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 NFKBIAP25963 317 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 GCLMP48507 274 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 IFNAR2P48551 515 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 UBE2HP62256 183 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 YWHAEP62258 255 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 PDE1BQ01064 536 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CSTF1Q05048 431 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 FOXM1Q08050 763 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 GOLGA8DPQ0D2H9 430 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 NIPAL4Q0D2K0 466 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZBTB17Q13105 803 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 PON2Q15165 354 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 MED22Q15528 200 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 MEA1Q16626 185 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CDONQ4KMG0 1287 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CBWD6Q4V339 395 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 RAB41Q5JT25 222 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CBWD3Q5JTY5 395 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 KCNT1Q5JUK3 1230 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 HECTD3Q5T447 861 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 FRG2Q64ET8 278 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ARHGAP17Q68EM7 881 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 PM20D1Q6GTS8 502 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPOPLQ6IQ16 392 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 TTI2Q6NXR4 508 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CLEC17AQ6ZS10 378 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CLEC20AQ6ZU45 233 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCDC186Q7Z3E2 898 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 EXOC3L1Q86VI1 746 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 LONP2Q86WA8 852 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 NAGSQ8N159 534 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 BEST3Q8N1M1 668 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SCML4Q8N228 414 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 PCDH20Q8N6Y1 951 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 FRMD1Q8N878 549 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 C12orf29Q8N999 325 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ANKRD52Q8NB46 1076 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC4A11Q8NBS3 891 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 POC1AQ8NBT0 407 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms