RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 DNAJC22Q8N4W6 341 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 C1orf52Q8N6N3 182 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 Q8N9G6 341 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 TRPV3Q8NET8 790 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 NT5CQ8TCD5 201 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 NCSTNQ92542 709 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ZFYVE21Q9BQ24 234 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 TUBB6Q9BUF5 446 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ZNF717Q9BY31 904 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 MRPL1Q9BYD6 325 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC6A16Q9GZN6 736 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 KLHL25Q9H0H3 589 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 TAGLN3Q9UI15 199 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 RUVBL1Q9Y265 456 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CPED1A4D0V7 1026 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 LRIT2A6NDA9 550 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC9B1P1A6NJY1 282 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 NDUFS4O43181 175 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 SH3BP5O60239 455 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 LRP3O75074 770 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 KLHL18O94889 574 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 SDC1P18827 310 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 TIA1P31483 386 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 HNRNPH1P31943 449 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 NBL1P41271 181 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 GABRA4P48169 554 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 DUSP3P51452 185 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 ARFIP1P53367 373 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 ACSM2AQ08AH3 577 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 SF3A2Q15428 464 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 INAVAQ3KP66 663 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 TMEM35AQ53FP2 167 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 CACHD1Q5VU97 1274 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 ACSM2BQ68CK6 577 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 PAOXQ6QHF9 649 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 WDR74Q6RFH5 385 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 FAM92BQ6ZTR7 304 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 PRSS42Q7Z5A4 293 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 ASPGQ86U10 573 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 LIX1Q8N485 282 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 AHCYL2Q96HN2 611 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 TMEM74Q96NL1 305 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 TGM7Q96PF1 710 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 FCRL4Q96PJ5 515 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 F2RL3Q96RI0 385 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 FAM60AQ9NP50 221 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC52A3Q9NQ40 469 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 LHX9Q9NQ69 397 aa14.07□□□□□ -0.16
SHKBP1-211ENST00000595945 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 A0A0J9YVX5 310 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 H0YGG7 62 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 PLPP1O14494 284 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 P2RX6O15547 441 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 FLRT2O43155 660 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 COX4I1P13073 169 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 JAK1P23458 1154 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 TACR1P25103 407 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 IL12AP29459 219 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 BSGP35613 385 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 GRK6P43250 576 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 ARF3P61204 181 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 UFM1P61960 85 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC14A1Q13336 389 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 PWP1Q13610 501 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 RPS6KA2Q15349 733 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 AMZ1Q400G9 498 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 AGKQ53H12 422 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 FRMPD2BQ6IN97 320 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 GK5Q6ZS86 529 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 COMMD6Q7Z4G1 85 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 PLXDC1Q8IUK5 500 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 OR9I1Q8NGQ6 314 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 RP9Q8TA86 221 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 WDR48Q8TAF3 677 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 PROKR1Q8TCW9 393 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC13A3Q8WWT9 602 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 MS4A6EQ96DS6 147 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 TCTN2Q96GX1 697 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC45A3Q96JT2 553 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 TEX37Q96LM6 180 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 ZNF285Q96NJ3 590 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 IRF2BPLQ9H1B7 796 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 KLHL31Q9H511 634 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 TXLNGQ9NUQ3 528 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 AHSPQ9NZD4 102 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 PDP2Q9P2J9 529 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 MCM8Q9UJA3 840 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 ADAM29Q9UKF5 820 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 HCN4Q9Y3Q4 1203 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 FAM186AA6NE01 2351 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 DNAH14Q0VDD8 3507 aa14.06□□□□□ -0.16
SHKBP1-211ENST00000595945 LOC105369274A0A096LPK9 316 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 LOC102723532A0A0G2JNH3 316 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 A0A1W2PQM1 296 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 C4orf51C9J302 202 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SAP18O00422 153 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CASC3O15234 703 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC22A3O75751 556 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms