RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 A0A1B0GUH1 482 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 SYNDIG1LA6NDD5 238 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 OR5H15A6NDH6 313 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 USP27XA6NNY8 438 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 E7ESA3 106 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 SGK494L7N484 410 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 E2F3O00716 465 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 FFAR3O14843 346 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 FANCGO15287 622 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 GPR42O15529 346 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 NDUFS4O43181 175 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 OR1F1O43749 312 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 GALR3O60755 368 aaPredicted RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 PRAMEF2O60811 474 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 BANF1O75531 89 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MLYCDO95822 493 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 STSP08842 583 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 ZNF37AP17032 561 aaPredicted RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 ALOX12P18054 663 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 IL1RNP18510 177 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 GSTM2P28161 218 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 HPDP32754 393 aaPredicted RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 ITGA8P53708 1063 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MAT1AQ00266 395 aaKnown RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 NSDHLQ15738 373 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 PPP1R3AQ16821 1122 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 SYT16Q17RD7 645 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 CDKL4Q5MAI5 379 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 ZNF324BQ6AW86 544 aaPredicted RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 FAAH2Q6GMR7 532 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 H3F3CQ6NXT2 135 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MTFR2Q6P444 385 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 TRMT10BQ6PF06 316 aaKnown RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 SBSNQ6UWP8 590 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MBOAT1Q6ZNC8 495 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 PRSS41Q7RTY9 318 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 ANKRD37Q7Z713 158 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 ZC3HC1Q86WB0 502 aaKnown RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 KLHL7Q8IXQ5 586 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 SLC5A8Q8N695 610 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 SIRT6Q8N6T7 355 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 KCT2Q8NC54 265 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 TTLQ8NG68 377 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 M1APQ8TC57 530 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 NT5CQ8TCD5 201 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 SLC5A11Q8WWX8 675 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 NR4A3Q92570 626 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 CFAP36Q96G28 342 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 CAPZA3Q96KX2 299 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 LPAR4Q99677 370 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 AIF1LQ9BQI0 150 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MESP1Q9BRJ9 268 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 CAPS2Q9BXY5 557 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 PITHD1Q9GZP4 211 aaPredicted RBP7.17□□□□□ -1.26
NPC1-208ENST00000590301 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPC1-208ENST00000590301 RHOJQ9H4E5 214 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 PELI2Q9HAT8 420 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MMP25Q9NPA2 562 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 STMN3Q9NZ72 180 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MOCS1Q9NZB8 636 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 HCN3Q9P1Z3 774 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 ZFP69BQ9UJL9 534 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 DCTN4Q9UJW0 460 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 CHMP2BQ9UQN3 213 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 NAALAD2Q9Y3Q0 740 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 DYRK1BQ9Y463 629 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 MYO9AB2RTY4 2548 aa7.17□□□□□ -1.26
NPC1-208ENST00000590301 PIKFYVEQ9Y2I7 2098 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 SPTBN1Q01082 2364 aaKnown RBP7.16□□□□□ -1.26
NPC1-208ENST00000590301 FAM95CA0A1B0GW59 222 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 FEZF1A0PJY2 475 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 FAM187AA6NFU0 413 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 EFCAB8A8MWE9 144 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 EIF3HO15372 352 aaKnown RBP eCLIP7.16□□□□□ -1.262e-6■■■□□ 17
NPC1-208ENST00000590301 TTI1O43156 1089 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 LCMT2O60294 686 aaKnown RBP7.16□□□□□ -1.26
NPC1-208ENST00000590301 PRMT3O60678 531 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 ICMTO60725 284 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 RDH16O75452 317 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 JRKO75564 520 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 SEC24DO94855 1032 aaPredicted RBP7.16□□□□□ -1.26
NPC1-208ENST00000590301 RASAL1O95294 804 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 WDPCPO95876 746 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 FHP07954 510 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 ITGAMP11215 1152 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 GNAZP19086 355 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 SCTRP47872 440 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 SLC12A2P55011 1212 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 TAS2R50P59544 299 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 REEP5Q00765 189 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 POU4F1Q01851 419 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 RHAGQ02094 409 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 ZNF33BQ06732 778 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 ACTN3Q08043 901 aaPredicted RBP7.16□□□□□ -1.26
NPC1-208ENST00000590301 PDIA2Q13087 525 aaKnown RBP7.16□□□□□ -1.26
NPC1-208ENST00000590301 CALCOCO2Q13137 446 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 ABRAXAS2Q15018 415 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 BTBD16Q32M84 506 aa7.16□□□□□ -1.26
NPC1-208ENST00000590301 DEFB134Q4QY38 66 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms