RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 IGFALSP35858 605 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 RPL3P39023 403 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 GAB1Q13480 694 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 RBBP5Q15291 538 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 EP400NLQ6ZTU2 488 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 STK32CQ86UX6 486 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 TDHQ8IZJ6 230 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ZCCHC7Q8N3Z6 543 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ABHD11Q8NFV4 315 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 TSPAN14Q8NG11 270 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 FBXL20Q96IG2 436 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 AIF1LQ9BQI0 150 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 SPATA9Q9BWV2 254 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 C1QTNF7Q9BXJ2 289 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 RHBGQ9H310 441 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 RMI1Q9H9A7 625 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 WASH6PQ9NQA3 447 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 VPS4AQ9UN37 437 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 CORO2BQ9UQ03 480 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 SLC17A4Q9Y2C5 497 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 A0A1W2PQF6 199 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 KLK1P06870 262 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 HOXB2P14652 356 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 ADRM1Q16186 407 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 LRRC23Q53EV4 343 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-211ENST00000568373 IER5LQ5T953 404 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 FAM71E1Q6IPT2 247 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 ADHFE1Q8IWW8 467 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 CLEC4FQ8N1N0 589 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 SVOPLQ8N434 492 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 METTL25Q8N6Q8 603 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 OR4A15Q8NGL6 344 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 ZFP90Q8TF47 636 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 SDCCAG3Q96C92 435 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 C12orf66Q96MD2 445 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 INSM2Q96T92 566 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-211ENST00000568373 TSC22D3Q99576 134 aa17.39■□□□□ 0.37
SMPD3-211ENST00000568373 CLK4Q9HAZ1 481 aaKnown RBP17.39■□□□□ 0.37
SMPD3-211ENST00000568373 CUEDC1Q9NWM3 386 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-211ENST00000568373 ZNF282Q9UDV7 671 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-211ENST00000568373 MAGED1Q9Y5V3 778 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-211ENST00000568373 A0A1W2PPV9 198 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 GNGT2O14610 69 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 HPRP00739 348 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 EGFP01133 1207 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 CXCR2P25025 360 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 CCR8P51685 355 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 IST1P53990 364 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 TAS2R50P59544 299 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 ADARB1P78563 741 aaKnown RBP17.38■□□□□ 0.37
SMPD3-211ENST00000568373 VAC14Q08AM6 782 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 C2orf80Q0P641 193 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 MLF2Q15773 248 aaPredicted RBP17.38■□□□□ 0.37
SMPD3-211ENST00000568373 SLC9B2Q86UD5 537 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 HORMAD1Q86X24 394 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 OR4K1Q8NGD4 311 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 PPCDCQ96CD2 204 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 FERD3LQ96RJ6 166 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 DPH2Q9BQC3 489 aaPredicted RBP17.38■□□□□ 0.37
SMPD3-211ENST00000568373 GRIP2Q9C0E4 1043 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 BTBD1Q9H0C5 482 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 CHST8Q9H2A9 424 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 CLDND1Q9NY35 253 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 LMCD1Q9NZU5 365 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 FZD4Q9ULV1 537 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 KCNK6Q9Y257 313 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 ANKDD1BA6NHY2 528 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 ANHXE9PGG2 379 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 H0YAE9 185 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 LATO43561 262 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 ZNF682O95780 498 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 CLIC3O95833 236 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 ALBP02768 609 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 COL9A1P20849 921 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 PSMB5P28074 263 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 MAGEA2P43356 314 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 NR1H2P55055 460 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 MC1RQ01726 317 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 VEZF1Q14119 521 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 NADK2Q4G0N4 442 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 USP51Q70EK9 711 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 LPCAT2Q7L5N7 544 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 PATL1Q86TB9 770 aaKnown RBP17.38■□□□□ 0.37
SMPD3-211ENST00000568373 SYNPOQ8N3V7 929 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 RAB42Q8N4Z0 105 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 LINC01555Q8NAE3 123 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 OR10Q1Q8NGQ4 319 aa17.38■□□□□ 0.37
SMPD3-211ENST00000568373 GOT1L1Q8NHS2 421 aaPredicted RBP17.38■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3DA0A087WVF3 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3IA0A087WXS9 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3EA0A087X179 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3KA0A087X1G2 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3FA6NER0 549 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3LB9A6J9 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 KLF8O95600 359 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBX6O95947 436 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 ABCB1P08183 1280 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3HP0C7X1 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 MAT2AP31153 395 aaKnown RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 KDELR2P33947 212 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms