RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 NUP210LQ5VU65 1888 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 IGKV1-8A0A0C4DH67 115 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 GOLGA6L10A6NI86 522 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 K7EPI3 171 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 CTSVO60911 334 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 HBQ1P09105 142 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 EZRP15311 586 aaKnown RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 GRK3P35626 688 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 PIK3CGP48736 1102 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 HSPA7P48741 367 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 CCR8P51685 355 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 CDC16Q13042 620 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 SSPNQ14714 243 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 PCBP2Q15366 365 aaKnown RBP eCLIP14.91□□□□□ -0.02
USB1-208ENST00000563207 INPP5JQ15735 1006 aaPredicted RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 PFKFB4Q16877 469 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 PLEKHN1Q494U1 663 aaPredicted RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 FRMPD2BQ6IN97 320 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 MED25Q71SY5 747 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 COX15Q7KZN9 410 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 HDXQ7Z353 690 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 ATCAYQ86WG3 371 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 PAQR7Q86WK9 346 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 SRRM1Q8IYB3 904 aaKnown RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 FAM26EQ8N5C1 309 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 AMER2Q8N7J2 671 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 TMEM102Q8N9M5 508 aaPredicted RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 OR4K1Q8NGD4 311 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 OR2Y1Q8NGV0 311 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 RDH11Q8TC12 318 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 SLC5A11Q8WWX8 675 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 CCDC126Q96EE4 140 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 PSMG3-AS1Q96PY0 264 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 OR4K3Q96R72 315 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 TMEM79Q9BSE2 394 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 IQCGQ9H095 443 aaKnown RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 SLC6A20Q9NP91 592 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 ENAMQ9NRM1 1142 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 ABCF3Q9NUQ8 709 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 DNAJC11Q9NVH1 559 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 P4HTMQ9NXG6 502 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 GPR83Q9NYM4 423 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 CPSF2Q9P2I0 782 aaKnown RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 NDOR1Q9UHB4 597 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 GPN3Q9UHW5 284 aaPredicted RBP14.91□□□□□ -0.02
USB1-208ENST00000563207 MID2Q9UJV3 735 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 ZNF451Q9Y4E5 1061 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 ACTL7BQ9Y614 415 aa14.91□□□□□ -0.02
USB1-208ENST00000563207 TCP11X1B4DZS4 312 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 H7BY64 318 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 SEMA7AO75326 666 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 VPS4BO75351 444 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 CXCR2P25025 360 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 FOLR3P41439 243 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 OR1D4P47884 311 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 PCDH1Q08174 1060 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 MRPL49Q13405 166 aaKnown RBP14.9□□□□□ -0.02
USB1-208ENST00000563207 PDK4Q16654 411 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 TNFAIP8L3Q5GJ75 292 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 TCTE1Q5JU00 501 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 DCAF10Q5QP82 559 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 TLDC1Q6P9B6 456 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 RNF44Q7L0R7 432 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 RAB43Q86YS6 212 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 SLC22A9Q8IVM8 553 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 TBC1D19Q8N5T2 526 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 BANPQ8N9N5 519 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 PROKR1Q8TCW9 393 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 THAP11Q96EK4 314 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 APOPT1Q96IL0 206 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 PRAP1Q96NZ9 151 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 SMAD5Q99717 465 aaKnown RBP14.9□□□□□ -0.02
USB1-208ENST00000563207 ZFYVE21Q9BQ24 234 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 NDC1Q9BTX1 674 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 SARGQ9BW04 601 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 PITHD1Q9GZP4 211 aaPredicted RBP14.9□□□□□ -0.02
USB1-208ENST00000563207 EHD1Q9H4M9 534 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 VIPAS39Q9H9C1 493 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 PELI2Q9HAT8 420 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 SSU72Q9NP77 194 aaKnown RBP14.9□□□□□ -0.02
USB1-208ENST00000563207 TXLNGQ9NUQ3 528 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 OPTCQ9UBM4 332 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 VPS4AQ9UN37 437 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 PADI2Q9Y2J8 665 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 LRRK2Q5S007 2527 aa14.9□□□□□ -0.02
USB1-208ENST00000563207 KCNE1BA0A087WTH5 132 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 LOC105369274A0A096LPK9 316 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 LOC102723532A0A0G2JNH3 316 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 TXNDC9O14530 226 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 CLGNO14967 610 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 CCNT2O60583 730 aaKnown RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 CDH1P12830 882 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 EPB42P16452 691 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 ATP5F1P24539 256 aaPredicted RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 GDF5P43026 501 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 NAA20P61599 178 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 RPS15AP62244 130 aaKnown RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 EIF2S3LQ2VIR3 472 aaKnown RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 YOD1Q5VVQ6 348 aaPredicted RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 FBXO42Q6P3S6 717 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms