RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ADGRF3Q8IZF5 1079 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 DEFB119Q8N690 84 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 NATD1Q8N6N6 113 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 ANKRD53Q8N9V6 530 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 SRFBP1Q8NEF9 429 aaKnown RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 FAM46DQ8NEK8 389 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 ZDHHC1Q8WTX9 485 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 ZUFSPQ96AP4 578 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 RSRC1Q96IZ7 334 aaKnown RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 EGLN2Q96KS0 407 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 GBP5Q96PP8 586 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 NRTNQ99748 197 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 KCTD14Q9BQ13 255 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 TWSG1Q9GZX9 223 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 MIR1-1HGQ9H1L0 117 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 TCEAL2Q9H3H9 227 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 ALG2Q9H553 416 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 REEP4Q9H6H4 257 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 SLC6A20Q9NP91 592 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 SPHK1Q9NYA1 384 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 NKX1-2Q9UD57 310 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 ATP6V1HQ9UI12 483 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 PACSIN3Q9UKS6 424 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 AP1M2Q9Y6Q5 423 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 IGKV1-8A0A0C4DH67 115 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 FEZF1A0PJY2 475 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 VILLO15195 856 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 CAPN5O15484 640 aaPredicted RBP13.19□□□□□ -0.3
TPM1-215ENST00000558868 NDUFS4O43181 175 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 ZW10O43264 779 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 ANP32DO95626 131 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 WNT1P04628 370 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 KLK1P06870 262 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 ANPEPP15144 967 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 C21orf59P57076 290 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 NXPH1P58417 271 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM1-215ENST00000558868 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
TPM1-215ENST00000558868 TRA2BP62995 288 aaKnown RBP13.19□□□□□ -0.3
TPM1-215ENST00000558868 MS4A2Q01362 244 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 LIPEQ05469 1076 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 TGM3Q08188 693 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 GPR18Q14330 331 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 UGT8Q16880 541 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 SLC5A12Q1EHB4 618 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 HKDC1Q2TB90 917 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 CCNYL2Q5T2Q4 361 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 LRIF1Q5T3J3 769 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 ZNF425Q6IV72 752 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 SPATA24Q86W54 205 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 NUDT13Q86X67 352 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 KIAA2013Q8IYS2 634 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 GOLM1Q8NBJ4 401 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 MFSD9Q8NBP5 474 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 BHLHE22Q8NFJ8 381 aaPredicted RBP13.19□□□□□ -0.3
TPM1-215ENST00000558868 SLC37A2Q8TED4 501 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 C16orf78Q8WTQ4 265 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 COQ8BQ96D53 544 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 PPM1MQ96MI6 270 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 ANKRD27Q96NW4 1050 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 LRRC61Q9BV99 259 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 BHLHE41Q9C0J9 482 aaPredicted RBP13.19□□□□□ -0.3
TPM1-215ENST00000558868 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
TPM1-215ENST00000558868 PRSS51A0A1B0GVH4 220 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 OR6C74A6NCV1 312 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 AQP12BA6NM10 295 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 SAP18O00422 153 aaKnown RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 BTN3A3O00478 584 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 RFXANKO14593 260 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 TNFSF14O43557 240 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 GMNNO75496 209 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 HTR1EP28566 365 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 GSK3BP49841 420 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 YBX1P67809 324 aaKnown RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 CYP4F2P78329 520 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 FOXK2Q01167 660 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 RELAQ04206 551 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 C2orf80Q0P641 193 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 TEAD4Q15561 434 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 ZIC1Q15915 447 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 RUNDC3AQ59EK9 446 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 RABL3Q5HYI8 236 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 KIAA1614Q5VZ46 1190 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 OR4F3Q6IEY1 312 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 ARMC6Q6NXE6 501 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 KLHL35Q6PF15 583 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 TMEM26Q6ZUK4 368 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 PAQR7Q86WK9 346 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 PROSER1Q86XN7 944 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms