RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 TELO2Q9Y4R8 837 aa14.4□□□□□ -0.1
LRRK1-201ENST00000388948 MYOCOSA0A1B0GUC4 107 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 ZNF84P51523 738 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 MAMDC4Q6UXC1 1216 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 TICAM1Q8IUC6 712 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 NINJ1Q92982 152 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 GAL3ST3Q96A11 431 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 MVB12BQ9H7P6 319 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 CSN2P05814 226 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 ZNF865P0CJ78 1059 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 OR2B6P58173 313 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 NNATQ16517 81 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 RGS21Q2M5E4 152 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 GOLGA7Q7Z5G4 137 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 ZNF761Q86XN6 746 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 OR5L2Q8NGL0 311 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 TMCO6Q96DC7 493 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 CNDP2Q96KP4 475 aaKnown RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 FBRSQ9HAH7 460 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 GRIA1P42261 906 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 IDH3AP50213 366 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 CRTC2Q53ET0 693 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 PLEKHS1Q5SXH7 462 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 SDR16C5Q8N3Y7 309 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 TRAM1L1Q8N609 369 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 ANKLE1Q8NAG6 615 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 NLGN4YQ8NFZ3 816 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 S100ZQ8WXG8 99 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 RMI1Q9H9A7 625 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 CAPN5O15484 640 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 SEC14L5O43304 696 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 CYBAP13498 195 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 ZNF16P17020 682 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 DSC1Q08554 894 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 PTPRCAPQ14761 206 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 GXYLT1Q4G148 440 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 DEFB134Q4QY38 66 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 LINGO2Q7L985 606 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 JAGN1Q8N5M9 183 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 BOLLQ8N9W6 283 aaKnown RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 A6NLC8 198 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 FOXO6A8MYZ6 492 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 GPR89AB7ZAQ6 455 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 GPR89BP0CG08 455 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 EDNRAP25101 427 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 POU6F2P78424 691 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 AMIGO3Q86WK7 504 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 OR4F6Q8NGB9 312 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 NFKBIDQ8NI38 313 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 WDR60Q8WVS4 1066 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 CD180Q99467 661 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 UCK2Q9BZX2 261 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 REXO2Q9Y3B8 237 aaKnown RBP14.39□□□□□ -0.11
LRRK1-201ENST00000388948 BACE2Q9Y5Z0 518 aa14.39□□□□□ -0.11
LRRK1-201ENST00000388948 HBQ1P09105 142 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 COL9A2Q14055 689 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 CARD17Q5XLA6 110 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 TAS1R3Q7RTX0 852 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 CCDC116Q8IYX3 515 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 SVOPLQ8N434 492 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 CMASQ8NFW8 434 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 GEMIN6Q8WXD5 167 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 CHCHD6Q9BRQ6 235 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 SMPD3Q9NY59 655 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 C11orf98E9PRG8 122 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 GABRA3P34903 492 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 NSDHLQ15738 373 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 ODF4Q2M2E3 257 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 THOC7Q6I9Y2 204 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 UTS2BQ765I0 119 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 ASB15Q8WXK1 588 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 ENY2Q9NPA8 101 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 DLGAP4Q9Y2H0 992 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 TMED5Q9Y3A6 229 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 OR7A10O76100 309 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 H1F0P07305 194 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 ARG2P78540 354 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 ALG10Q5BKT4 473 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 UNQ6126/PRO20091Q6UXV3 157 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 SLCO3A1Q9UIG8 710 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 STOML2Q9UJZ1 356 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 KIAA0100Q14667 2235 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 FAM172BPA6NC97 362 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 C6P13671 934 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 SGCAQ16586 387 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 OCLNQ16625 522 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 NRROSQ86YC3 692 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 GMLQ99445 158 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 G6PC3Q9BUM1 346 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 NOBOXO60393 691 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 STC2O76061 302 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 CD72P21854 359 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 PMS2P3Q13401 168 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 LDLRAD1Q5T700 205 aa14.38□□□□□ -0.11
LRRK1-201ENST00000388948 BAZ2AQ9UIF9 1905 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 MTHFD1P11586 935 aaKnown RBP14.38□□□□□ -0.11
LRRK1-201ENST00000388948 RNH1P13489 461 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms