RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FETUBQ9UGM5 382 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 EDARQ9UNE0 448 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ASB3Q9Y575 518 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 A0A1W2PPM1 405 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 BOLA2-SMG1P6H3BVE0 249 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 MSI1O43347 362 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 HMGN1P05114 100 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 CDKN2BP42772 138 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 SIM2Q14190 667 aaPredicted RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 FUBP3Q96I24 572 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCF11-201ENST00000298281 SGCZQ96LD1 299 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 NUFIP1Q9UHK0 495 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 PADI3Q9ULW8 664 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 TESMINQ9Y4I5 508 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 IFNA1P01562 189 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 IFNA7P01567 189 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 DLDP09622 509 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 TSTD2Q5T7W7 516 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 KIAA1161Q6NSJ0 714 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 NPAS4Q8IUM7 802 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 DENND1AQ8TEH3 1009 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 LPGAT1Q92604 370 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 WDR55Q9H6Y2 383 aaPredicted RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ANGPTL7O43827 346 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 CRISP3P54108 245 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ANKRD46Q86W74 232 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 SERPINA9Q86WD7 417 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 TMIEQ8NEW7 156 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ANKRA2Q9H9E1 313 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ASB6Q9NWX5 421 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 SERTAD3Q9UJW9 196 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 RPL36Q9Y3U8 105 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 ZNF638Q14966 1978 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 LRCH4O75427 683 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 GP1BBP13224 206 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 PHOSPHO1Q8TCT1 267 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 LMX1AQ8TE12 382 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ALG3Q92685 438 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 MAN2C1Q9NTJ4 1040 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 TMEM184CQ9NVA4 438 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ASCC3Q8N3C0 2202 aaKnown RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 J3QLW9 94 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ZNF19P17023 458 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 UGT1A3P35503 534 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 CD83Q01151 205 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ADGRD2Q7Z7M1 963 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 PDSS2Q86YH6 399 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 OR8K5Q8NH50 307 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 C9orf43Q8TAL5 461 aaPredicted RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 NMUR2Q9GZQ4 415 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 RANBP3Q9H6Z4 567 aaPredicted RBP11.73□□□□□ -0.53
PCF11-201ENST00000298281 RLIMQ9NVW2 624 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 CASC3O15234 703 aaKnown RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 ZNF84P51523 738 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 GPR33Q49SQ1 333 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 DNAJA3Q96EY1 480 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 PTGES2Q9H7Z7 377 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 CNTN6Q9UQ52 1028 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 PDE10AQ9Y233 779 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 LOC102723532A0A0G2JNH3 316 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 H0Y8G0 127 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 SERPINA7P05543 415 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ZBTB48P10074 688 aaPredicted RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 ANXA8P13928 327 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 NELFEP18615 380 aaKnown RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 MON1BQ7L1V2 547 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ACDQ96AP0 544 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 TMEM109Q9BVC6 243 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 CHRAC1Q9NRG0 131 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 FLRT2O43155 660 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 GADD45GO95257 159 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 SLC6A4P31645 630 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 RAB31Q13636 194 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 AMZ2Q86W34 360 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 IQCKQ8N0W5 287 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 RAD9AQ99638 391 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 PCDHGA2Q9Y5H1 932 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ZNF850A8MQ14 1090 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 MT-CO2P00403 227 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 C4BPAP04003 597 aaKnown RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 EFNA1P20827 205 aaPredicted RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 P2RX1P51575 399 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 TATDN1Q6P1N9 297 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 RBM15BQ8NDT2 890 aaKnown RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 LIPHQ8WWY8 451 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 B3GNT5Q9BYG0 378 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 KAT8Q9H7Z6 458 aaKnown RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 LRFN1Q9P244 771 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 OTOP3Q7RTS5 596 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 RAB2BQ8WUD1 216 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 LRRC58Q96CX6 371 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ZDHHC12Q96GR4 267 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms