RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 ACTL8Q9H568 366 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 IGLON5A6NGN9 336 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 SLC1A7O00341 560 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 KRT75O95678 551 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 C1QCP02747 245 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 AMD1P17707 334 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.47
UBXN4-201ENST00000272638 VLDLRP98155 873 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 ELP6Q0PNE2 266 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 DNASE1L3Q13609 305 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 CYP4Z1Q86W10 505 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 CACTIN-AS1Q8N1I8 211 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 C7orf57Q8NEG2 295 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 SLC9A6Q92581 669 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 TMEM203Q969S6 136 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 TRMT2BQ96GJ1 504 aaKnown RBP12.08□□□□□ -0.47
UBXN4-201ENST00000272638 BARD1Q99728 777 aaKnown RBP12.08□□□□□ -0.47
UBXN4-201ENST00000272638 PPT2Q9UMR5 302 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 ENTPD4Q9Y227 616 aa12.08□□□□□ -0.47
UBXN4-201ENST00000272638 AIREO43918 545 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 NFATC1O95644 943 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 APOA1P02647 267 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 LCKP06239 509 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 PIM1P11309 404 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF30P17039 623 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 NKG7Q16617 165 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 RPS26P11Q5JNZ5 115 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 ATG9BQ674R7 924 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 CEP68Q76N32 757 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 SPRED2Q7Z698 418 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 OR9Q2Q8NGE9 314 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 RAB2BQ8WUD1 216 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 SLC5A11Q8WWX8 675 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 NRTNQ99748 197 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 CLMPQ9H6B4 373 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 PSME2Q9UL46 239 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 BOLA2-SMG1P6H3BVE0 249 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 H7C0S8 307 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 TBX1O43435 398 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 PI15O43692 258 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 NPPAP01160 153 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 FPR1P21462 350 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 CLEC12AQ5QGZ9 265 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 LIPIQ6XZB0 460 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 TMEM150AQ86TG1 271 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 DCP2Q8IU60 420 aaKnown RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 OR9A1PQ8NGU1 263 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 TP53INP1Q96A56 240 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 NTMT1Q9BV86 223 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 CARS2Q9HA77 564 aaKnown RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 H2AFY2Q9P0M6 372 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 OTOFQ9HC10 1997 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 A0A1W2PP55 124 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 BMP10O95393 424 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 LRRC26Q2I0M4 334 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 TBC1D19Q8N5T2 526 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF557Q8N988 423 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 BPIFB1Q8TDL5 484 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF480Q8WV37 535 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 UBE2E3Q969T4 207 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 DCAF13Q9NV06 445 aaKnown RBP12.08□□□□□ -0.48
UBXN4-201ENST00000272638 TVP23BQ9NYZ1 205 aa12.08□□□□□ -0.48
UBXN4-201ENST00000272638 FADS2P1A8MWK0 482 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ALPLP05186 524 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 B4GALNT1Q00973 533 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ID2Q02363 134 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 SLC14A1Q13336 389 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 COLEC12Q5KU26 742 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 MMP21Q8N119 569 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 MFSD2AQ8NA29 543 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 FATE1Q969F0 183 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 KCNS3Q9BQ31 491 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 RHNO1Q9BSD3 238 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 TMEM245Q9H330 911 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 KCNK12Q9HB15 430 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 TM7SF3Q9NS93 570 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 EHD3Q9NZN3 535 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 SARDHQ9UL12 918 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 PCDHGB3Q9Y5G1 929 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 DOCK6Q96HP0 2047 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 FZD6O60353 706 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 CH25HO95992 272 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ACADMP11310 421 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 TIA1P31483 386 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF763Q0D2J5 394 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 TARDBPQ13148 414 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBXN4-201ENST00000272638 CBLBQ13191 982 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 GATAD2AQ86YP4 633 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ARMC8Q8IUR7 673 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 AQP11Q8NBQ7 271 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 KCT2Q8NC54 265 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 RAD18Q9NS91 495 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF282Q9UDV7 671 aaPredicted RBP12.07□□□□□ -0.48
UBXN4-201ENST00000272638 J3KTA2 159 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 ARNTLO00327 626 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 TFECO14948 347 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms