RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CHTF18Q8WVB6 975 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 GATA6Q92908 595 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 ITCHQ96J02 903 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 NR1H4Q96RI1 486 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 LRRC61Q9BV99 259 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 RPF2Q9H7B2 306 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 SLC6A13Q9NSD5 602 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 MAGEL2Q9UJ55 1249 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 CNOT11Q9UKZ1 510 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 PIPSLA2A3N6 862 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 PTPN6P29350 595 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 C21orf59P57076 290 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 RPS13P62277 151 aaKnown RBP21.7■■□□□ 1.06
CDX1-201ENST00000231656 C1orf61Q13536 156 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 PGS1Q32NB8 556 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 GTDC1Q4AE62 458 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 PAGE2BQ5JRK9 111 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 TBCELQ5QJ74 424 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 PRAMEF14Q5SWL7 426 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 PRAMEF13Q5VWM6 474 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 LCTLQ6UWM7 567 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 SEMA6AQ9H2E6 1030 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 MVB12BQ9H7P6 319 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 RMND5AQ9H871 391 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 TAAR2Q9P1P5 351 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 HEBP2Q9Y5Z4 205 aa21.7■■□□□ 1.06
CDX1-201ENST00000231656 DMDP11532 3685 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 FOXE1O00358 373 aaPredicted RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 HNRNPRO43390 633 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 KRT33BQ14525 404 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 SF1Q15637 639 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 UGT8Q16880 541 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 ZNF528Q3MIS6 628 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 MTX3Q5HYI7 312 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 TAF8Q7Z7C8 310 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 DTWD1Q8N5C7 304 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 C1orf52Q8N6N3 182 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 GFM2Q969S9 779 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 CCDC115Q96NT0 180 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 CAMK1GQ96NX5 476 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 SH3GL1Q99961 368 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 CPPED1Q9BRF8 314 aaPredicted RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 INPP5KQ9BT40 448 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 MENTQ9BUN1 341 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 SPNS1Q9H2V7 528 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 TMEM74BQ9NUR3 256 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 AURKCQ9UQB9 309 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 PCDHB14Q9Y5E9 798 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 PRAMEF33A0A0G2JMD5 474 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 EIF4E1BA6NMX2 242 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 MYO1DO94832 1006 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 B3GALT4O96024 378 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 UMPSP11172 480 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 ZNF26P17031 533 aaPredicted RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 GGT1P19440 569 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 IL10P22301 178 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 SOX11P35716 441 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 MRPS35P82673 323 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 ARHGAP19Q14CB8 494 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 CYP51A1Q16850 503 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 DPY19L1Q2PZI1 675 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 SPIN4Q56A73 249 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 GLYATQ6IB77 296 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 AMIGO2Q86SJ2 522 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 ANKFN1Q8N957 763 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 PAPD5Q8NDF8 572 aaKnown RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 NRTNQ99748 197 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 ZNF624Q9P2J8 865 aaPredicted RBP21.69■■□□□ 1.06
CDX1-201ENST00000231656 AP3M1Q9Y2T2 418 aa21.69■■□□□ 1.06
CDX1-201ENST00000231656 AKAP10O43572 662 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 SP9P0CG40 484 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 BMP2P12643 396 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 CNR2P34972 360 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 KIR3DL1P43629 444 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 FOLH1Q04609 750 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 LAPTM5Q13571 262 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 TEAD4Q15561 434 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 CYP2A13Q16696 494 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 OR4F3Q6IEY1 312 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 IYDQ6PHW0 289 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 GPR180Q86V85 440 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 ANKRD46Q86W74 232 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 ZNF548Q8NEK5 533 aaPredicted RBP21.68■■□□□ 1.06
CDX1-201ENST00000231656 TRPV3Q8NET8 790 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 EME1Q96AY2 570 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 HAUS8Q9BT25 410 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 THUMPD3Q9BV44 507 aaKnown RBP21.68■■□□□ 1.06
CDX1-201ENST00000231656 DMRT3Q9NQL9 472 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 ZSCAN32Q9NX65 697 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 PILRBQ9UKJ0 227 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 COLEC10Q9Y6Z7 277 aa21.68■■□□□ 1.06
CDX1-201ENST00000231656 TRBV23OR9-2A0A075B6M9 112 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 A0A1B0GTW7 788 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 GNSP15586 552 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 CDKN2CP42773 168 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 WNT3P56703 355 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 SRSF11Q05519 484 aaKnown RBP21.67■■□□□ 1.06
CDX1-201ENST00000231656 HIST2H2ACQ16777 129 aaPredicted RBP21.67■■□□□ 1.06
CDX1-201ENST00000231656 THEMIS2Q5TEJ8 643 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 HIST2H2AA3Q6FI13 130 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms