RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 FAM90A10PA6NDY2 464 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 SLC9B1P1A6NJY1 282 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 CCL16O15467 120 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 NDUFS4O43181 175 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 AP5Z1O43299 807 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 CHMP2AO43633 222 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RNF8O76064 485 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 NDUFB4O95168 129 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 LETM1O95202 739 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 MOCS3O95396 460 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 IFNB1P01574 187 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 HEXBP07686 556 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 ABHD2P08910 425 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RAB40ALP0C0E4 278 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 ZNF806P0C7X5 589 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 HRH2P25021 359 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 MPZP25189 248 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PSMB4P28070 264 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 FRKP42685 505 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 CXCL12P48061 93 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PPP3CCP48454 512 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 ZNF75DP51815 510 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 TPD52P55327 224 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 DGCR2P98153 550 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 CDK3Q00526 305 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 ELAVL2Q12926 359 aaKnown RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 ZNF169Q14929 603 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PSMD5Q16401 504 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 LPAL2Q16609 132 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 MEP1AQ16819 746 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 CDO1Q16878 200 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 MIDNQ504T8 468 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 LY6G5CQ5SRR4 150 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PRAMEF8Q5VWM4 474 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 NCAPH2Q6IBW4 605 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 LCN10Q6JVE6 187 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 METTL2BQ6P1Q9 378 aaKnown RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PODNL1Q6PEZ8 512 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 BRAT1Q6PJG6 821 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PRSS55Q6UWB4 352 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 MEPCEQ7L2J0 689 aaKnown RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 AMIGO2Q86SJ2 522 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 CCDC83Q8IWF9 413 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 TBC1D21Q8IYX1 336 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 BEST3Q8N1M1 668 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 FBXL16Q8N461 479 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 SPEM1Q8N4L4 309 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RNF149Q8NC42 400 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 OR52E1Q8NGJ3 308 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PSMA8Q8TAA3 256 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 BICD2Q8TD16 824 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RAD54LQ92698 747 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RIT1Q92963 219 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 SLC25A28Q96A46 364 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 SYAP1Q96A49 352 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RHBDF1Q96CC6 855 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 TRIM44Q96DX7 344 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 ZNF503Q96F45 646 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 METTL2AQ96IZ6 378 aaKnown RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 PLEKHG4BQ96PX9 1271 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 FAM111AQ96PZ2 611 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 SMC6Q96SB8 1091 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 TSPY26PQ9H489 355 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 NXF3Q9H4D5 531 aaKnown RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 KLHL31Q9H511 634 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 XPNPEP1Q9NQW7 623 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 WRAP73Q9P2S5 460 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 RCOR1Q9UKL0 485 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 TMEM184BQ9Y519 407 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 HES2Q9Y543 173 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 EPN1Q9Y6I3 576 aaPredicted RBP4.44□□□□□ -1.7
CDRT1-208ENST00000630868 SPTA1P02549 2419 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 KALRNO60229 2985 aa4.44□□□□□ -1.7
CDRT1-208ENST00000630868 KLF18A0A0U1RQI7 1052 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 A0A1B0GUA9 196 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 A0A1W2PPQ1 181 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 TARM1B6A8C7 271 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 TMEM189-UBE2V1I3L0A0 370 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 XRCC3O43542 346 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 OR10H2O60403 315 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 ERLIN2O94905 339 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 PEX11BO96011 259 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 CEBPBP17676 345 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 ARF4P18085 180 aaPredicted RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 VCLP18206 1134 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 EEF1B2P24534 225 aaKnown RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 ACAT1P24752 427 aaKnown RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 RPA1P27694 616 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 OR1D2P34982 312 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 SERPINB6P35237 376 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 APOBEC1P41238 236 aaKnown RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 QARSP47897 775 aaKnown RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 FASLGP48023 281 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 UCP2P55851 309 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 SLC26A5P58743 744 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 SNRPEP62304 92 aaKnown RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 POLR2LP62875 67 aaKnown RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
CDRT1-208ENST00000630868 CFHR1Q03591 330 aa4.43□□□□□ -1.7
CDRT1-208ENST00000630868 MBTD1Q05BQ5 628 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms