RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	PRRG3	Q9BZD7	231 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	GOLGA2P5	Q9HBQ8	144 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	POLE4	Q9NR33	117 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	TMEM30A	Q9NV96	361 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	RBFOX1	Q9NWB1	397 aa	Known RBP	11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	FLRT1	Q9NZU1	646 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	IL17C	Q9P0M4	197 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	VPS4A	Q9UN37	437 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	DUSP12	Q9UNI6	340 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ABCG2	Q9UNQ0	655 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	MGAT4B	Q9UQ53	548 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	AUP1	Q9Y679	476 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236		V9GYH0	126 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ZNF638	Q14966	1978 aa	Known RBP	11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PTPRD	P23468	1912 aa		11.35	□□□□□ -0.59
U2AF1L4-221	ENST00000601236		A0A1W2PQH9	124 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	LINC00862	A6NCI5	91 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	OR5K3	A6NET4	321 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ARL5C	A6NH57	179 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	SGK494	L7N484	410 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ENPP3	O14638	875 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	MITF	O75030	526 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	SOCS5	O75159	536 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	EGFR	P00533	1210 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	MYCLP1	P12525	358 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PEPD	P12955	493 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ENG	P17813	658 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	HIST1H2AD	P20671	130 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ALDH4A1	P30038	563 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	FGF9	P31371	208 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ADCYAP1R1	P41586	468 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	NSG1	P42857	185 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	GSTM5	P46439	218 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	KCNJ10	P78508	379 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	VLDLR	P98155	873 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ILK	Q13418	452 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	KLHL22	Q53GT1	634 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	SPIN4	Q56A73	249 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ZRANB3	Q5FWF4	1079 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	NOMO2	Q5JPE7	1267 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	FAM209A	Q5JX71	171 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	GPRC6A	Q5T6X5	926 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	CD300LD	Q6UXZ3	194 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ZBTB46	Q86UZ6	589 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	CCDC71	Q8IV32	467 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	SULF1	Q8IWU6	871 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	OR8J1	Q8NGP2	316 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	DNAJB3	Q8WWF6	145 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PLD4	Q96BZ4	506 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PYCR2	Q96C36	320 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	REPS1	Q96D71	796 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	HIST1H2AH	Q96KK5	128 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	KLHL5	Q96PQ7	755 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PIP5K1A	Q99755	562 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	HIST1H2AJ	Q99878	128 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	H2AFJ	Q9BTM1	129 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	SLC12A9	Q9BXP2	914 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	TRIM8	Q9BZR9	551 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	CXCL16	Q9H2A7	254 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	CHST8	Q9H2A9	424 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	SLC25A19	Q9HC21	320 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	TXNRD2	Q9NNW7	524 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	MRPS18A	Q9NVS2	196 aa	Known RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	VNN3	Q9NY84	501 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	MARCH2	Q9P0N8	246 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	COPZ2	Q9P299	210 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	AGO1	Q9UL18	857 aa	Known RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	KCTD3	Q9Y597	815 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236		U3KQV3	271 aa		11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	TNS1	Q9HBL0	1735 aa	Known RBP	11.34	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	PLXNB2	O15031	1838 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	LOC100506127	A0A0U1RQW1	187 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NCF1B	A6NI72	391 aa	Predicted RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	AGAP14	A8MT82	685 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NCF1C	A8MVU1	366 aa	Predicted RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NFKBIE	O00221	500 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TAPBP	O15533	448 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SLC19A2	O60779	497 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ZNF780A	O75290	641 aa	Predicted RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NIPSNAP2	O75323	286 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PEX14	O75381	377 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	COL6A1	P12109	1028 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	JUP	P14923	745 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	AMD1	P17707	334 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SDC1	P18827	310 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TACR2	P21452	398 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	HOXD9	P28356	352 aa	Predicted RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GTF2E2	P29084	291 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	IFNA8	P32881	189 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RCVRN	P35243	200 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	LIMS1	P48059	325 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	EPHA4	P54764	986 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SRP54	P61011	504 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NKX3-2	P78367	333 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GALK2	Q01415	458 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms