RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ANXA13P27216 316 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCR3P51677 355 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CLCNKAP51800 687 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC7A9P82251 487 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 FKBP3Q00688 224 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 POU3F1Q03052 451 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 LRRC63Q05C16 580 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CSTF3Q12996 717 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 GRIK2Q13002 908 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 RUNX3Q13761 415 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 MTF1Q14872 753 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PDGFRLQ15198 375 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF77Q15935 545 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF699Q32M78 642 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ITPRIPL2Q3MIP1 535 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 KRT39Q6A163 491 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 DUS1LQ6P1R4 473 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CYP20A1Q6UW02 462 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 UNQ6126/PRO20091Q6UXV3 157 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PAQR9Q6ZVX9 377 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ADSSL1Q8N142 457 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 NUP93Q8N1F7 819 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPEM1Q8N4L4 309 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAB21L3Q8N8X9 362 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SUMF1Q8NBK3 374 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 OR14L1PQ8NHC6 308 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 UCMAQ8WVF2 138 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SORCS1Q8WY21 1168 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 FIG4Q92562 907 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 IGSF8Q969P0 613 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 EXOC4Q96A65 974 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SMARCD1Q96GM5 515 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TMEM19Q96HH6 336 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 DHTKD1Q96HY7 919 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 HARBI1Q96MB7 349 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 IL17FQ96PD4 163 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ACOX2Q99424 681 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 HNRNPABQ99729 332 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PCGF1Q9BSM1 259 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 DNAI2Q9GZS0 605 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SDCBP2Q9H190 292 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SNX25Q9H3E2 840 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 RETREG1Q9H6L5 497 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF556Q9HAH1 456 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 LMAN1LQ9HAT1 526 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 DMAP1Q9NPF5 467 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 HPS4Q9NQG7 708 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PLSCR4Q9NRQ2 329 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 GKN1Q9NS71 199 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ACSS1Q9NUB1 689 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TMEM30AQ9NV96 361 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 GTSE1Q9NYZ3 720 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 AASSQ9UDR5 926 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 LIMA1Q9UHB6 759 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 HOOK1Q9UJC3 728 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 KCNS2Q9ULS6 477 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 VDAC3Q9Y277 283 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 MTF2Q9Y483 593 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PSAT1Q9Y617 370 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 KCNE2Q9Y6J6 123 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PIAS3Q9Y6X2 628 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 FRYLO94915 3013 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 NYNRINQ9P2P1 1898 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 IGHV4OR15-8A0A075B7B6 117 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 A0A0G2JPF8 293 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM237BA0A1B0GVD1 139 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 HNRNPCL3B7ZW38 293 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 HHLA1C9JL84 531 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRAC2D3DTV9 90 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRR23D1E9PI22 279 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC9A3R1O14745 358 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PSMA7O14818 248 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 P4HA2O15460 535 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 HNRNPCL1O60812 293 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 KINO60870 393 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCNDBP1O95273 360 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 MLYCDO95822 493 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRR23D2P0DMB1 279 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 HNRNPCL4P0DMR1 293 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TNFAIP3P21580 790 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCNE1P24864 410 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAN1A1P33908 653 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 EIF2DP41214 584 aaKnown RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PIK3CAP42336 1068 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRCPP42785 496 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CXCL12P48061 93 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 NDST1P52848 882 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 F2RL1P55085 397 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CDH8P55286 799 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 CSNK2A1P68400 391 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC20A2Q08357 652 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 ILF3Q12906 894 aaKnown RBP eCLIP3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TAF10Q12962 218 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 PNOCQ13519 176 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 MDH1BQ5I0G3 518 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 SDHAF4Q5VUM1 108 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAAH2Q6GMR7 532 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 WBP2NLQ6ICG8 309 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 TUBA1AQ71U36 451 aa3.5□□□□□ -1.85
CKS1BP3-201ENST00000600888 DPPA4Q7L190 304 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms