RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PRR35P0CG20 571 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 MST1P26927 711 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 CSNK1G2P78368 415 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 SRSF11Q05519 484 aaKnown RBP11.22□□□□□ -0.61
GABPB1-206ENST00000543881 PTK6Q13882 451 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 FAM53BQ14153 422 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 PHKG1Q16816 387 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 NDUFAF7Q7L592 441 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 CNTN4Q8IWV2 1026 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 KBTBD2Q8IY47 623 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 OR9A4Q8NGU2 314 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 BRIX1Q8TDN6 353 aaKnown RBP11.22□□□□□ -0.61
GABPB1-206ENST00000543881 HAS2Q92819 552 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 SLCO2A1Q92959 643 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 POM121Q96HA1 1249 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
GABPB1-206ENST00000543881 ATG10Q9H0Y0 220 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 MKKSQ9NPJ1 570 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-206ENST00000543881 CCDC177Q9NQR7 707 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-206ENST00000543881 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 TAS2R13Q9NYV9 303 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 ABI3Q9P2A4 366 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 SEC14L3Q9UDX4 400 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
GABPB1-206ENST00000543881 KCNE1BA0A087WTH5 132 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 FEZF1A0PJY2 475 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 C19orf84I3L1E1 186 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 TXNDC9O14530 226 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 LCMT2O60294 686 aaKnown RBP11.21□□□□□ -0.61
GABPB1-206ENST00000543881 BMP10O95393 424 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 TSPAN12O95859 305 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 CRYABP02511 175 aaKnown RBP11.21□□□□□ -0.61
GABPB1-206ENST00000543881 HEXBP07686 556 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 ANXA5P08758 320 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 CAPN3P20807 821 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 SOX11P35716 441 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 RBPJQ06330 500 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 PCOLCEQ15113 449 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 BBS9Q3SYG4 887 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 SPANXN3Q5MJ09 141 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 HP1BP3Q5SSJ5 553 aaPredicted RBP11.21□□□□□ -0.61
GABPB1-206ENST00000543881 UGT3A1Q6NUS8 523 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 AGTRAPQ6RW13 159 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 TMEM205Q6UW68 189 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 CDH24Q86UP0 819 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 SIRT6Q8N6T7 355 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 MCOLN3Q8TDD5 553 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 TM4SF19Q96DZ7 209 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 CERS2Q96G23 380 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 SGPP1Q9BX95 441 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.21□□□□□ -0.613e-8■□□□□ 8.9
GABPB1-206ENST00000543881 PARVBQ9HBI1 364 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
GABPB1-206ENST00000543881 NCOA6Q14686 2063 aaPredicted RBP11.21□□□□□ -0.62
GABPB1-206ENST00000543881 MTORP42345 2549 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 OR2W5A6NFC9 320 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 USP27XA6NNY8 438 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 RASAL1O95294 804 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 TTC4O95801 387 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 F10P00742 488 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 SERPINA7P05543 415 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 C8GP07360 202 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 NPPBP16860 134 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 AGAP20933 346 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 HRH2P25021 359 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 CXCR2P25025 360 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 BCL6P41182 706 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 RGS4P49798 205 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 CASP6P55212 293 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 RPS15AP62244 130 aaKnown RBP11.2□□□□□ -0.62
GABPB1-206ENST00000543881 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 NAE1Q13564 534 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 TEDDM1Q5T9Z0 273 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 LRRC8EQ6NSJ5 796 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 TMEM214Q6NUQ4 689 aaKnown RBP11.2□□□□□ -0.62
GABPB1-206ENST00000543881 TRMT10BQ6PF06 316 aaKnown RBP11.2□□□□□ -0.62
GABPB1-206ENST00000543881 KCT2Q8NC54 265 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 DNAJB8Q8NHS0 232 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 ALKBH8Q96BT7 664 aaKnown RBP11.2□□□□□ -0.62
GABPB1-206ENST00000543881 LINGO1Q96FE5 620 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 IMMP1LQ96LU5 166 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 VN1R1Q9GZP7 353 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 ZNF700Q9H0M5 742 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 IKZF3Q9UKT9 509 aa11.2□□□□□ -0.62
GABPB1-206ENST00000543881 CACNA1CQ13936 2221 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 IGHV3-20A0A0C4DH32 117 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 H0YIG0 161 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 SGK494L7N484 410 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 TP73O15350 636 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 SLC16A5O15375 505 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 SLC19A2O60779 497 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 NSA2O95478 260 aaKnown RBP11.19□□□□□ -0.62
GABPB1-206ENST00000543881 UQCRHP07919 91 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 ITGAMP11215 1152 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 ESRRAP11474 423 aaPredicted RBP11.19□□□□□ -0.62
GABPB1-206ENST00000543881 CDH1P12830 882 aa11.19□□□□□ -0.62
GABPB1-206ENST00000543881 IL1RNP18510 177 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 421.1 ms