RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 UFSP2Q9NUQ7 469 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 EXD2Q9NVH0 621 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TAS2R1Q9NYW7 299 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 HEY2Q9UBP5 337 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CHORDC1Q9UHD1 332 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TUBE1Q9UJT0 475 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF112Q9UJU3 913 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TINAGQ9UJW2 476 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RPS6KA6Q9UK32 745 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 APPL1Q9UKG1 709 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 DAPP1Q9UN19 280 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 LAMP3Q9UQV4 416 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 EIF3LQ9Y262 564 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PCDHA10Q9Y5I2 948 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 KCNE2Q9Y6J6 123 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAU2Q9Y6X3 613 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RIC1Q4ADV7 1423 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 NRAPQ86VF7 1730 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PLCH1Q4KWH8 1693 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MYH7P12883 1935 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MYH13Q9UKX3 1938 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 STK36Q9NRP7 1315 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ABCA3Q99758 1704 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 LY6G6EA0A0G2JKS1 128 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ESYT2A0FGR8 921 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMEM210A6NLX4 147 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 LRRC53A6NM62 1247 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF879B4DU55 563 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 KCNJ18B7U540 433 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 J3KRW8 73 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PLK4O00444 970 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 DNALI1O14645 258 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 FPGTO14772 594 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TNPO2O14787 897 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 AIM2O14862 343 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SMAD6O43541 496 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 DENRO43583 198 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ITM2AO43736 263 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCNKO75909 580 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SEMA3DO95025 777 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 LYPLA2O95372 231 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 KRT19P08727 400 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SMIM18P0DKX4 95 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 RARGP13631 454 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF23P17027 643 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCNA2P20248 432 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 IMPDH1P20839 514 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CST5P28325 142 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PRDX6P30041 224 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 GDI1P31150 447 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ACSL1P33121 698 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 RCVRNP35243 200 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC15A1P46059 708 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCT3P49368 545 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 RGS19P49795 217 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPCS3P61009 180 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MRPS5P82675 430 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SHC2P98077 582 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 IFITM2Q01629 132 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 IL1RL1Q01638 556 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CREB5Q02930 508 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TFCP2Q12800 502 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ILF2Q12905 390 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRAF2Q12933 501 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CHAF1BQ13112 559 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 STX5Q13190 355 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 APOFQ13790 326 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF846Q147U1 533 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PDK3Q15120 406 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDK10Q15131 360 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZMYND11Q15326 602 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 INPP5JQ15735 1006 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SGCAQ16586 387 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MMEL1Q495T6 779 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MIDNQ504T8 468 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 YIF1BQ5BJH7 314 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 LIN54Q6MZP7 749 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARHGAP11AQ6P4F7 1023 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 COLCA1Q6ZS62 124 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARPINQ7Z6K5 226 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 DEFB132Q7Z7B7 95 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TBC1D10CQ8IV04 446 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF619Q8N2I2 560 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 C11orf65Q8NCR3 313 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR5T2Q8NGG2 359 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR56B2PQ8NGI1 322 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR52N1Q8NH53 320 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM172AQ8WUF8 416 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 POMGNT1Q8WZA1 660 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PIK3R3Q92569 461 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TLCD1Q96CP7 247 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 LRRC39Q96DD0 335 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MCRS1Q96EZ8 462 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PGM2Q96G03 612 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 APOPT1Q96IL0 206 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 NSMCE2Q96MF7 247 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF48Q96MX3 618 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF347Q96SE7 839 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MECRQ9BV79 373 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms