RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ABCF3Q9NUQ8 709 aa13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 TAS2R13Q9NYV9 303 aa13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 ABI3Q9P2A4 366 aa13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 SNX12Q9UMY4 172 aa13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 NCOA6Q14686 2063 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-203ENST00000437813 CTAGE15A4D2H0 777 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 SGK494L7N484 410 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 ZG16O60844 167 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 SEC24DO94855 1032 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 F10P00742 488 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 CDH1P12830 882 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 XCR1P46094 333 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 AVPR1BP47901 424 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 RHAGQ02094 409 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 NAE1Q13564 534 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 SPANXN3Q5MJ09 141 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 TEDDM1Q5T9Z0 273 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 C1QL3Q5VWW1 255 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 ANKRD37Q7Z713 158 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 CTAGE6Q86UF2 777 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 C17orf64Q86WR6 236 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 MFSD9Q8NBP5 474 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 MOCOSQ96EN8 888 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 YIPF2Q9BWQ6 316 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 FAM129AQ9BZQ8 928 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 HCN3Q9P1Z3 774 aa13.59□□□□□ -0.23
TNFRSF1A-203ENST00000437813 TACC2O95359 2948 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 DNAJB6O75190 326 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 WFS1O76024 890 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CCND1P24385 295 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 RGS4P49798 205 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 KCNK10P57789 538 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 AP2B1P63010 937 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PPP1R3AQ16821 1122 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 STEAP4Q687X5 459 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 DUPD1Q68J44 220 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CAPN13Q6MZZ7 669 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TRMT10BQ6PF06 316 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SBSNQ6UWP8 590 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TMEM207Q6UWW9 146 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 STRA8Q7Z7C7 330 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ASPGQ86U10 573 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CAMKVQ8NCB2 501 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MDS2Q8NDY4 140 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PLPP5Q8NEB5 264 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 LINGO1Q96FE5 620 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CERS2Q96G23 380 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PDLIM5Q96HC4 596 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 OLFM1Q99784 485 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PCDHGB6Q9Y5F9 930 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PKDREJQ9NTG1 2253 aa13.58□□□□□ -0.24
TNFRSF1A-203ENST00000437813 NRDCO43847 1150 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MAN1A2O60476 641 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 GALR3O60755 368 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PRAMEF2O60811 474 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 RDH16O75452 317 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 AP1S2P56377 157 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PER3P56645 1201 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SRSF11Q05519 484 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 HYAL2Q12891 473 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CBLBQ13191 982 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 FRG1Q14331 258 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ACER2Q5QJU3 275 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ABHD17BQ5VST6 288 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 OR5T3Q8NGG3 340 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 DNAJB8Q8NHS0 232 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SLC13A3Q8WWT9 602 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PYCR2Q96C36 320 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 FBXL8Q96CD0 374 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SNF8Q96H20 258 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PWWP2AQ96N64 755 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 OR1F2PQ96R84 312 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 HAUS8Q9BT25 410 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MCMBPQ9BTE3 642 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MMP25Q9NPA2 562 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 STMN3Q9NZ72 180 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 NAALAD2Q9Y3Q0 740 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TEX264Q9Y6I9 313 aa13.57□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TEP1Q99973 2627 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 A0A1B0GUH1 482 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TRBC2A0A5B9 178 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SMIM10L1P0DMW3 83 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PRF1P14222 555 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 IL10P22301 178 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 AGTR2P50052 363 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 IL2P60568 153 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 MEF2AQ02078 507 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PWP1Q13610 501 aa13.56□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PPP1R7Q15435 360 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms