RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ADGRD1Q6QNK2 874 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 FER1L6-AS2Q96M78 137 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 TMEM79Q9BSE2 394 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 CD244Q9BZW8 370 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 MKKSQ9NPJ1 570 aaPredicted RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 SEMA3GQ9NS98 782 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 SLC22A11Q9NSA0 550 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 PSMC3IPQ9P2W1 217 aaPredicted RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 MAP4K5Q9Y4K4 846 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 TNPO3Q9Y5L0 923 aaKnown RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 FEZF1A0PJY2 475 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 VSTM2BA6NLU5 285 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 MKRN2OSH3BPM6 223 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 P2RX6O15547 441 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 NDUFS4O43181 175 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 KLHL41O60662 606 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 FAM153BP0C7A2 387 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 C1GALT1C1LP0DN25 315 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 SCTRP47872 440 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 OR1D4P47884 311 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 PIK3CGP48736 1102 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 HSPA7P48741 367 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 ALDH18A1P54886 795 aaKnown RBP17.6■□□□□ 0.41
CHTOP-202ENST00000368687 NFKB2Q00653 900 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 LAPTM5Q13571 262 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 LY6DQ14210 128 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 SLC29A2Q14542 456 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 SLC9A5Q14940 896 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 NKG7Q16617 165 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 FAM153CQ494X1 144 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 ATP1A1-AS1Q5TC04 95 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 SLCO4C1Q6ZQN7 724 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 COX15Q7KZN9 410 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 ABHD13Q7L211 337 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 ZNF843Q8N446 348 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 UHMK1Q8TAS1 419 aaKnown RBP17.6■□□□□ 0.41
CHTOP-202ENST00000368687 NT5CQ8TCD5 201 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 EXT2Q93063 718 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 MIEF2Q96C03 454 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 MMABQ96EY8 250 aaPredicted RBP17.6■□□□□ 0.41
CHTOP-202ENST00000368687 EFCAB11Q9BUY7 163 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 TGIF2Q9GZN2 237 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 NT5DC2Q9H857 520 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 ANKHQ9HCJ1 492 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 ACSS2Q9NR19 701 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 COPG2Q9UBF2 871 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 OPTCQ9UBM4 332 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 MAU2Q9Y6X3 613 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 BOD1L1Q8NFC6 3051 aa17.6■□□□□ 0.41
CHTOP-202ENST00000368687 TRIM49D1C9J1S8 452 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 TAPBPO15533 448 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 FURINP09958 794 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 FAM87AP0C7U9 286 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 GFAPP14136 432 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 IL10P22301 178 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 MMP11P24347 488 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 GDF5P43026 501 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 IRF9Q00978 393 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 TBCCQ15814 346 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 TMIGD1Q6UXZ0 262 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 TIFABQ6ZNK6 161 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 MRGPREQ86SM8 312 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 SNX31Q8N9S9 440 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 UBE2E3Q969T4 207 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 WDR34Q96EX3 536 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 PTCD3Q96EY7 689 aaKnown RBP17.59■□□□□ 0.41
CHTOP-202ENST00000368687 SPSB2Q99619 263 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 CLK4Q9HAZ1 481 aaKnown RBP17.59■□□□□ 0.41
CHTOP-202ENST00000368687 TRPC4Q9UBN4 977 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 CTSFQ9UBX1 484 aa17.59■□□□□ 0.41
CHTOP-202ENST00000368687 NUP210LQ5VU65 1888 aa17.58■□□□□ 0.41
CHTOP-202ENST00000368687 K7EPI3 171 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 UBXN8O00124 270 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 LCMT2O60294 686 aaKnown RBP17.58■□□□□ 0.4
CHTOP-202ENST00000368687 CCNT2O60583 730 aaKnown RBP17.58■□□□□ 0.4
CHTOP-202ENST00000368687 MED26O95402 600 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 SERPINA6P08185 405 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 ZGLP1P0C6A0 271 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 OTX2P32243 289 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 GLRBP48167 497 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 STXBP1P61764 594 aaKnown RBP17.58■□□□□ 0.4
CHTOP-202ENST00000368687 PCDH1Q08174 1060 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 SETDB1Q15047 1291 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 HIST2H2ACQ16777 129 aaPredicted RBP17.58■□□□□ 0.4
CHTOP-202ENST00000368687 HIST2H2AA3Q6FI13 130 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 METTL27Q8N6F8 245 aaPredicted RBP17.58■□□□□ 0.4
CHTOP-202ENST00000368687 STT3BQ8TCJ2 826 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 ACMSDQ8TDX5 336 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 GPR78Q96P69 363 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 ING2Q9H160 280 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 SLC25A18Q9H1K4 315 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 ANKZF1Q9H8Y5 726 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 SYNPO2LQ9H987 977 aa17.58■□□□□ 0.4
CHTOP-202ENST00000368687 ZNF462Q96JM2 2506 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 A0A088AWK7 358 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 A0A0A6YYC8 382 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 I3L1I5 382 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 MAP2K7O14733 419 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 FOXS1O43638 330 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 KLK8O60259 260 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms