RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 OR52A4PA6NMU1 304 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 HRO43593 1189 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 ETHE1O95571 254 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 EML2O95834 649 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 MTHFD1P11586 935 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 JUNDP17535 347 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 KLC1Q07866 573 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 BLMHQ13867 455 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 CATSPEREQ5SY80 951 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 ATG9BQ674R7 924 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 MED27Q6P2C8 311 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 TBC1D21Q8IYX1 336 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 ADGRG5Q8IZF4 528 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 HUS1BQ8NHY5 278 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 FAM110BQ8TC76 370 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 EGLN2Q96KS0 407 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 BTBD9Q96Q07 612 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 EBPLQ9BY08 206 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 TRIT1Q9H3H1 467 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 SERHLQ9NQF3 203 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 IMP3Q9NV31 184 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 RUVBL1Q9Y265 456 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 MAGEB17A8MXT2 336 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 VILLO15195 856 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 NCK1P16333 377 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 HRH2P25021 359 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 S100A3P33764 101 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 DHPSP49366 369 aaPredicted RBP21.73■■□□□ 1.07
CDX1-201ENST00000231656 CSNK1EP49674 416 aaKnown RBP21.73■■□□□ 1.07
CDX1-201ENST00000231656 AFF3P51826 1226 aaKnown RBP21.73■■□□□ 1.07
CDX1-201ENST00000231656 RPE65Q16518 533 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 LYSMD4Q5XG99 296 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 HMBOX1Q6NT76 420 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 ICA1LQ8NDH6 482 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 FERD3LQ96RJ6 166 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 PAIP1Q9H074 479 aaKnown RBP21.73■■□□□ 1.07
CDX1-201ENST00000231656 EHD1Q9H4M9 534 aa21.73■■□□□ 1.07
CDX1-201ENST00000231656 CCDC177Q9NQR7 707 aaPredicted RBP21.73■■□□□ 1.07
CDX1-201ENST00000231656 TDRKHQ9Y2W6 561 aaKnown RBP21.73■■□□□ 1.07
CDX1-201ENST00000231656 A6NCN8 305 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 PRMT3O60678 531 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 C1GALT1C1LP0DN25 315 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 ERGP11308 486 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 PCNAP12004 261 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 CTSEP14091 401 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 UQCRBP14927 111 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 HOXB9P17482 250 aaPredicted RBP21.72■■□□□ 1.07
CDX1-201ENST00000231656 AVPR2P30518 371 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 NXPH1P58417 271 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 RUNDC3AQ59EK9 446 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 LRIF1Q5T3J3 769 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 PROSER1Q86XN7 944 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 DNAJB8Q8NHS0 232 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 SLC5A11Q8WWX8 675 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 NELL1Q92832 810 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 IL17FQ96PD4 163 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 EFCAB11Q9BUY7 163 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 GSDMCQ9BYG8 508 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 KCNH6Q9H252 994 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 PIF1Q9H611 641 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 BATF3Q9NR55 127 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 APOBEC3BQ9UH17 382 aaKnown RBP21.72■■□□□ 1.07
CDX1-201ENST00000231656 CACNA1EQ15878 2313 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 PI4KAP42356 2102 aa21.72■■□□□ 1.07
CDX1-201ENST00000231656 A0A096LPI6 279 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 LRATO95237 230 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 CSF2P04141 144 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 GPIP06744 558 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 PRPS1L1P21108 318 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 C21orf58P58505 322 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 RAE1P78406 368 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 TSTA3Q13630 321 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 SLBPQ14493 270 aaKnown RBP eCLIP21.71■■□□□ 1.07
CDX1-201ENST00000231656 PLK5Q496M5 336 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 AASDHQ4L235 1098 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 NXPE4Q6UWF7 544 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 MSANTD1Q6ZTZ1 278 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 ERMP1Q7Z2K6 904 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 LAS2Q8IYD9 372 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 SETD7Q8WTS6 366 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 REPS1Q96D71 796 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 ZNF583Q96ND8 569 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 IKZF5Q9H5V7 419 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 GEMIN8Q9NWZ8 242 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 PLAGL1Q9UM63 463 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 ERN1O75460 977 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 TIPRLO75663 272 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 CELA2BP08218 269 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 F3P13726 295 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 NME1P15531 152 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 PSMA4P25789 261 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 HNRNPFP52597 415 aaKnown RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 CYP4F3Q08477 520 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 ACSM2AQ08AH3 577 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 PRRT3Q5FWE3 981 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 C10orf62Q5T681 223 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 ACSM2BQ68CK6 577 aa21.71■■□□□ 1.07
CDX1-201ENST00000231656 DNAJC14Q6Y2X3 702 aaPredicted RBP21.71■■□□□ 1.07
CDX1-201ENST00000231656 SYT12Q8IV01 421 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms