RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 NACC2Q96BF6 587 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 WDFY2Q96P53 400 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 CNPPD1Q9BV87 410 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 C11orf54Q9H0W9 315 aaPredicted RBP17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 NSUN3Q9H649 340 aaKnown RBP17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 TMLHEQ9NVH6 421 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 IQCF5A8MTL0 148 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 E5RI56 91 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 PITPNM1O00562 1244 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 ULK1O75385 1050 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 CBLP22681 906 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 BRCC3P46736 316 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 AP2S1P53680 142 aaPredicted RBP17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 SBSNQ6UWP8 590 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 FAM124AQ86V42 546 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 KRT73Q86Y46 540 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 GRAMD2AQ8IUY3 354 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 KCNJ9Q92806 393 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 TRIB3Q96RU7 358 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 RNF208Q9H0X6 261 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 RNF121Q9H920 327 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 ELOVL2Q9NXB9 296 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 DLGAP4Q9Y2H0 992 aa17.08■□□□□ 0.33
CDKN1B-201ENST00000228872 SLC35F4A4IF30 521 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 TAPBPO15533 448 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 FFAR2O15552 330 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 CLDN8P56748 225 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 PSPHP78330 225 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 TEKQ02763 1124 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 CSTF3Q12996 717 aaKnown RBP17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 TUSC3Q13454 348 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 TNK1Q13470 666 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 RNF165Q6ZSG1 346 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 GLT6D1Q7Z4J2 308 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 NARFLQ9H6Q4 476 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.32
CDKN1B-201ENST00000228872 MANBAO00462 879 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 RFXANKO14593 260 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 STX7O15400 261 aaKnown RBP17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 DPM1O60762 260 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 NOS1APO75052 506 aaPredicted RBP17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 KCNK5O95279 499 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 CCNYL3P0C7X3 344 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 ZNF235Q14590 738 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 ESCO2Q56NI9 601 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 NLRP8Q86W28 1048 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 B3GNT7Q8NFL0 401 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 C7orf34Q96L11 122 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 FEVQ99581 238 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 TAPBPLQ9BX59 468 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 NMUR1Q9HB89 426 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 EXOSC4Q9NPD3 245 aaKnown RBP17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 MS4A12Q9NXJ0 267 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 PPT2Q9UMR5 302 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 PCDHGA2Q9Y5H1 932 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 M0R129 80 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 WDR47O94967 919 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 HLA-DMAP28067 261 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 HOXC5Q00444 222 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 ZNF767PQ75MW2 155 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 PTOV1Q86YD1 416 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 DENND6BQ8NEG7 585 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 MDGA1Q8NFP4 955 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 TPD52L3Q96J77 140 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 CCM2Q9BSQ5 444 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 CDCA4Q9BXL8 241 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 UCK2Q9BZX2 261 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 TMEM184CQ9NVA4 438 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 KLHL21Q9UJP4 597 aa17.07■□□□□ 0.32
CDKN1B-201ENST00000228872 H3BM21 787 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 AKR7A2O43488 359 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 TLR5O60602 858 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 GUCA1CO95843 209 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 CSF2P04141 144 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 COL6A1P12109 1028 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 UQCRC1P31930 480 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 TTPAP49638 278 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 KCNQ1P51787 676 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 GPNMBQ14956 572 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 BTBD16Q32M84 506 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 C5orf22Q49AR2 442 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 SLC35F1Q5T1Q4 408 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 TIGD3Q6B0B8 471 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 XKRXQ6PP77 449 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 PAMR1Q6UXH9 720 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 FAM181AQ8N9Y4 354 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 SERPINB11Q96P15 392 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 SMIM14Q96QK8 99 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 FAM83DQ9H4H8 585 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 NIPAL2Q9H841 368 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 TMPRSS11EQ9UL52 423 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 PCDHGB3Q9Y5G1 929 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 PATJQ8NI35 1801 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 NBNO60934 754 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 CYP2A6P11509 494 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms