RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 JPH3Q8WXH2 748 aaPredicted RBP17.39■□□□□ 0.38
VIM-201ENST00000224237 GFM2Q969S9 779 aaKnown RBP17.39■□□□□ 0.38
VIM-201ENST00000224237 MS4A8Q9BY19 250 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 NANOGQ9H9S0 305 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 S100A14Q9HCY8 104 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 TMEM184CQ9NVA4 438 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 SPHK1Q9NYA1 384 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 A0A1W2PR77 199 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 TRBC2A0A5B9 178 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 ISM1B1AKI9 464 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 MAP3K13O43283 966 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 OR1F1O43749 312 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 STAMBPO95630 424 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 JUNDP17535 347 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 GSTM2P28161 218 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 ZXDAP98168 799 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 PGS1Q32NB8 556 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.37
VIM-201ENST00000224237 TSSK4Q6SA08 328 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 BHLHE22Q8NFJ8 381 aaPredicted RBP17.39■□□□□ 0.37
VIM-201ENST00000224237 CDC26Q8NHZ8 85 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 PPM1MQ96MI6 270 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 TACO1Q9BSH4 297 aaKnown RBP17.39■□□□□ 0.37
VIM-201ENST00000224237 ALG2Q9H553 416 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 SLC6A20Q9NP91 592 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 STOML1Q9UBI4 398 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 MCM8Q9UJA3 840 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 ANGPTL2Q9UKU9 493 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 MAN2B2Q9Y2E5 1009 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 ARHGEF17Q96PE2 2063 aaPredicted RBP17.39■□□□□ 0.37
VIM-201ENST00000224237 HEATR5BQ9P2D3 2071 aa17.39■□□□□ 0.37
VIM-201ENST00000224237 SAP18O00422 153 aaKnown RBP17.38■□□□□ 0.37
VIM-201ENST00000224237 SCAMP2O15127 329 aaKnown RBP17.38■□□□□ 0.37
VIM-201ENST00000224237 AKAP10O43572 662 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 WNT1P04628 370 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 COX7A2P14406 83 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 HPCAL1P37235 193 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 GTF2A1P52655 376 aaPredicted RBP17.38■□□□□ 0.37
VIM-201ENST00000224237 EEFSECP57772 596 aaKnown RBP17.38■□□□□ 0.37
VIM-201ENST00000224237 CYP4F2P78329 520 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 PHC1P78364 1004 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 SLC34A1Q06495 639 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 BNIP2Q12982 314 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 UGT8Q16880 541 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 HKDC1Q2TB90 917 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 PRRT3Q5FWE3 981 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 RABL3Q5HYI8 236 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 DEPDC1Q5TB30 811 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 KHDRBS2Q5VWX1 349 aaKnown RBP17.38■□□□□ 0.37
VIM-201ENST00000224237 SLC9B2Q86UD5 537 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 ADGRF3Q8IZF5 1079 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 FBXL6Q8N531 539 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 TBC1D19Q8N5T2 526 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 OR8J3Q8NGG0 315 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 OR8J2Q8NGG1 315 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 PYDC1Q8WXC3 89 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 ITCHQ96J02 903 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 HSPA12BQ96MM6 686 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 ANKRD27Q96NW4 1050 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 CENPKQ9BS16 269 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 LRRC61Q9BV99 259 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 PCDHAC1Q9H158 963 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 KCNH6Q9H252 994 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 CPNE7Q9UBL6 633 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 SDK1Q7Z5N4 2213 aa17.38■□□□□ 0.37
VIM-201ENST00000224237 DNAJA2O60884 412 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 ERN1O75460 977 aaKnown RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 CLEC3AO75596 197 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 TBX6O95947 436 aaPredicted RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 CSF2P04141 144 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 UBE2IP63279 158 aaKnown RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 PLIN5Q00G26 463 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 GPR18Q14330 331 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 KIR2DS3Q14952 304 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 DPH7Q9BTV6 452 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 SARGQ9BW04 601 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 TWSG1Q9GZX9 223 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 MIR1-1HGQ9H1L0 117 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 VAPAQ9P0L0 249 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 DLGAP2Q9P1A6 1054 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 TDRD6O60522 2096 aaKnown RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 FAM221BA6H8Z2 402 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 TLR4O00206 839 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 BTN3A3O00478 584 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 NME1P15531 152 aaKnown RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 LRIF1Q5T3J3 769 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 KIAA1614Q5VZ46 1190 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 ZFP1Q6P2D0 407 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 MAMSTRQ6ZN01 415 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 CAMKMTQ7Z624 323 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 SFTPA2Q8IWL1 248 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 FAM20CQ8IXL6 584 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 TMEFF1Q8IYR6 380 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 NAGSQ8N159 534 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 OR7A2PQ8NGA2 310 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 WDR48Q8TAF3 677 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 SLC37A2Q8TED4 501 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 PATE1Q8WXA2 126 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 PRPF18Q99633 342 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms