RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 F2rl3O88634 396 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cxcr5Q04683 374 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Uap1l1Q3TW96 507 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Q3U7U4 132 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Sec24dQ6NXL1 1032 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ubxn7Q6P5G6 467 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Znf775Q8BI73 538 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cep68Q8C0D9 733 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Dcun1d3Q8K0V2 304 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Rpe65Q91ZQ5 533 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gstt3Q99L20 241 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Snx7Q9CY18 387 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Katnal2Q9D3R6 539 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Armc1Q9D7A8 282 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tmigd1Q9D7L8 261 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Usp12Q9D9M2 370 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Kctd14A0A0U1RNG7 287 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Zfp352A2AML7 551 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Nrp2O35375 931 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 TrhrP21761 393 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Id2P41136 134 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Entpd1P55772 510 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Htr4P97288 388 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Msto1Q2YDW2 556 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Smu1Q3UKJ7 513 aaKnown RBP14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Actr3bQ641P0 418 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Lats2Q7TSJ6 1042 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 C1raQ8CG16 707 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Klk6Q91Y82 253 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cstf3Q99LI7 717 aaKnown RBP14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Mcm8Q9CWV1 833 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 CacybpQ9CXW3 229 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Exosc7Q9D0M0 291 aaKnown RBP14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ebna1bp2Q9D903 306 aaKnown RBP14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pfn3Q9DAD6 137 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Dclre1aQ9JIC3 1026 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Fads3Q9JJE7 449 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Smpd3Q9JJY3 655 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Nrf1Q9WU00 503 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ect2lA0A140LIP2 953 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Serpina3jD3Z451 420 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Olfr564E9PWA8 316 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Srp54bE9PXC0 504 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Olfr220E9Q050 325 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gm1110F6Y113 635 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Vmn1r31L7N2F1 303 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 H2-Q7P14429 334 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 H2-Q9P14431 200 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tgfb3P17125 410 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 FasP25446 327 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 GhrhrP32082 423 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Zfp78Q5U406 512 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pdcd4Q61823 469 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Nr0b2Q62227 260 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 KdsrQ6GV12 332 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Atl1Q8BH66 558 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 AcmsdQ8R519 336 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Olfr850Q8VFF2 315 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Oas1hQ8VI97 369 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Masp2Q91WP0 685 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Prps2Q9CS42 318 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Nde1Q9CZA6 344 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Sh2d4aQ9D7V1 421 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pnp2Q9D8C9 305 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Snrnp200Q6P4T2 2136 aaKnown RBP14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 L3mbtl1A2A5N8 826 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gm20441G3UYJ7 252 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cd93O89103 644 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 GzmcP08882 248 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Galnt3P70419 633 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Fezf1Q0VDQ9 475 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pkp4Q68FH0 1190 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Zpbp2Q6X786 326 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Teddm1aQ810U2 305 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Mblac2Q8BL86 279 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Galnt13Q8CF93 556 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 CcsapQ8QZT2 252 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Sh3glb2Q8R3V5 400 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gtf2a1lQ8R4I4 468 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Catsper1Q91ZR5 686 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Taf11Q99JX1 211 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 3300002I08RikQ9CXH3 147 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Mtif3Q9CZD5 276 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Sppl2aQ9JJF9 523 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Olfr1508Q9R0K4 310 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Aqp5Q9WTY4 265 aa14.24□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tex13aA2AFS9 377 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Fam170bE9PXT9 378 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gm3248K7N721 186 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ephb6O08644 1014 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tacr2P30549 384 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ephx2P34914 554 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Kcna7Q17ST2 489 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Armcx5Q3UZB0 606 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Grhl3Q5FWH3 603 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Klf4Q60793 483 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ap5m1Q8BJ63 490 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 N4bp2l2Q8JZS6 575 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 B3gnt7Q8K0J2 397 aa14.23□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gpr18Q8K1Z6 331 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 90.8 ms