RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CUEDC1Q9NWM3 386 aaPredicted RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 SNX24Q9Y343 169 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 OARD1Q9Y530 152 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 TRBC2A0A5B9 178 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 CDK2AP1O14519 115 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 GP5P40197 560 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 PHKG1Q16816 387 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 KCTD19Q17RG1 926 aaPredicted RBP15.89■□□□□ 0.13
USB1-211ENST00000565662 CRB2Q5IJ48 1285 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 FAM69BQ5VUD6 431 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 ATG9BQ674R7 924 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 TMEM214Q6NUQ4 689 aaKnown RBP15.89■□□□□ 0.13
USB1-211ENST00000565662 IGFL2Q6UWQ7 119 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 ABHD13Q7L211 337 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 ARHGEF39Q8N4T4 335 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 FAM26EQ8N5C1 309 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 METTL27Q8N6F8 245 aaPredicted RBP15.89■□□□□ 0.13
USB1-211ENST00000565662 MFSD9Q8NBP5 474 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 TRPV3Q8NET8 790 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 SLC13A3Q8WWT9 602 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 SLC5A11Q8WWX8 675 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 LMF1Q96S06 567 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 AIF1LQ9BQI0 150 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 TUBB6Q9BUF5 446 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 YIPF2Q9BWQ6 316 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 DERL2Q9GZP9 239 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 ATG10Q9H0Y0 220 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 PLAC1Q9HBJ0 212 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 TEKT2Q9UIF3 430 aa15.89■□□□□ 0.13
USB1-211ENST00000565662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
USB1-211ENST00000565662 TNRC6AQ8NDV7 1962 aaKnown RBP15.89■□□□□ 0.13
USB1-211ENST00000565662 RAD51CO43502 376 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 CDH1P12830 882 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 NPPBP16860 134 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 JAK1P23458 1154 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 SPRP35270 261 aaPredicted RBP15.88■□□□□ 0.13
USB1-211ENST00000565662 ATP6V0D1P61421 351 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 MEF2AQ02078 507 aaPredicted RBP15.88■□□□□ 0.13
USB1-211ENST00000565662 INAQ16352 499 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 PPP1R3AQ16821 1122 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 NADK2Q4G0N4 442 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 SBSNQ6UWP8 590 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 ISLR2Q6UXK2 745 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 Q6ZS92 163 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 CNPY4Q8N129 248 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 RBMXL3Q8N7X1 1067 aaKnown RBP15.88■□□□□ 0.13
USB1-211ENST00000565662 AMER3Q8N944 861 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 OR4K1Q8NGD4 311 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.88■□□□□ 0.13
USB1-211ENST00000565662 TM4SF19Q96DZ7 209 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 OLFM1Q99784 485 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 EGFL8Q99944 293 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 WDR83Q9BRX9 315 aaKnown RBP15.88■□□□□ 0.13
USB1-211ENST00000565662 SAYSD1Q9NPB0 183 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 AGPAT4Q9NRZ5 378 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 GPRC5BQ9NZH0 403 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 CTNNAL1Q9UBT7 734 aa15.88■□□□□ 0.13
USB1-211ENST00000565662 TENM4Q6N022 2769 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 LOC102723996A0A087X1L8 192 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 A0A088AWK7 358 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 A0A0A6YYC8 382 aaPredicted RBP15.87■□□□□ 0.13
USB1-211ENST00000565662 I3L1I5 382 aaPredicted RBP15.87■□□□□ 0.13
USB1-211ENST00000565662 TP73O15350 636 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 FOXS1O43638 330 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 NRP2O60462 931 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 BMP10O95393 424 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 SERPINA7P05543 415 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 UQCRHP07919 91 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 C8orf89P0DMQ9 161 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 STMN1P16949 149 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 GNAZP19086 355 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 ZNF10P21506 573 aaPredicted RBP15.87■□□□□ 0.13
USB1-211ENST00000565662 BCL6P41182 706 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 MLLT10P55197 1068 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 TLR1Q15399 786 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 INPP5JQ15735 1006 aaPredicted RBP15.87■□□□□ 0.13
USB1-211ENST00000565662 HP1BP3Q5SSJ5 553 aaPredicted RBP15.87■□□□□ 0.13
USB1-211ENST00000565662 VN1R4Q7Z5H5 301 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 ALKBH8Q96BT7 664 aaKnown RBP15.87■□□□□ 0.13
USB1-211ENST00000565662 GPR22Q99680 433 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 DPH5Q9H2P9 285 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 ZFP69BQ9UJL9 534 aa15.87■□□□□ 0.13
USB1-211ENST00000565662 ASH1LQ9NR48 2969 aaKnown RBP15.86■□□□□ 0.13
USB1-211ENST00000565662 DYTNA2CJ06 578 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 KIF2AO00139 706 aaPredicted RBP15.86■□□□□ 0.13
USB1-211ENST00000565662 P2RX6O15547 441 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 ALOX12BO75342 701 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 F7P08709 466 aaPredicted RBP15.86■□□□□ 0.13
USB1-211ENST00000565662 YBX1P67809 324 aaKnown RBP15.86■□□□□ 0.13
USB1-211ENST00000565662 MFAP5Q13361 173 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 UBAP2LQ14157 1087 aaKnown RBP15.86■□□□□ 0.13
USB1-211ENST00000565662 FASTKD3Q14CZ7 662 aaKnown RBP15.86■□□□□ 0.13
USB1-211ENST00000565662 VWA2Q5GFL6 755 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 GRTP1Q5TC63 336 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 C8orf74Q6P047 294 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 TMEM205Q6UW68 189 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 SYT10Q6XYQ8 523 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 C3orf62Q6ZUJ4 267 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 KLHDC8AQ8IYD2 350 aa15.86■□□□□ 0.13
USB1-211ENST00000565662 C7orf57Q8NEG2 295 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms