RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 GRK3P35626 688 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 FOXL2P58012 376 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 RPS18P62269 152 aaKnown RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 NFKB2Q00653 900 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 ABHD18Q0P651 414 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 DOC2AQ14183 400 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 SLBPQ14493 270 aaKnown RBP eCLIP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 COL28A1Q2UY09 1125 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 KRT71Q3SY84 523 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 XKR6Q5GH73 641 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 BROXQ5VW32 411 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 RHBDD2Q6NTF9 364 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 FAM198BQ6UWH4 519 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 GOLGA7Q7Z5G4 137 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 ASPGQ86U10 573 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 ANKRD53Q8N9V6 530 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 ZCCHC10Q8TBK6 192 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 LRFN5Q96NI6 719 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 AIF1LQ9BQI0 150 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 ROPN1BQ9BZX4 212 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 GPN2Q9H9Y4 310 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 ROPN1Q9HAT0 212 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 GEMIN8Q9NWZ8 242 aaKnown RBP12.23□□□□□ -0.45
VEGFA-224ENST00000523873 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 LGALS13Q9UHV8 139 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 SRPK3Q9UPE1 567 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 MAU2Q9Y6X3 613 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 PCSK5Q92824 1860 aa12.23□□□□□ -0.45
VEGFA-224ENST00000523873 KCNE1BA0A087WTH5 132 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CCDC189A1A4V9 331 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 FFAR3O14843 346 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 DSCR3O14972 297 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 GPR42O15529 346 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 DLX3O60479 287 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 GLRA3O75311 464 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 KATNA1O75449 491 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CAPN1P07384 714 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 HBQ1P09105 142 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CREB1P16220 341 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 SCTRP47872 440 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 OR1D4P47884 311 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 ARSFP54793 590 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CXADRP78310 365 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 RELAQ04206 551 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CHIT1Q13231 466 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 GTF2H2Q13888 395 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 PCBP2Q15366 365 aaKnown RBP eCLIP12.22□□□□□ -0.451e-10■■□□□ 11.4
VEGFA-224ENST00000523873 BEND6Q5SZJ8 279 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 ATG9BQ674R7 924 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 GTF2H2CQ6P1K8 395 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 TRABD2AQ86V40 505 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 SRRM1Q8IYB3 904 aaKnown RBP12.22□□□□□ -0.45
VEGFA-224ENST00000523873 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■■■ 40.2
VEGFA-224ENST00000523873 SHISA5Q8N114 240 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 KCT2Q8NC54 265 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 SLC13A3Q8WWT9 602 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 NSUN5Q96P11 429 aaKnown RBP12.22□□□□□ -0.45
VEGFA-224ENST00000523873 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 SLC22A11Q9NSA0 550 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 DCDC2Q9UHG0 476 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 ANGPTL3Q9Y5C1 460 aa12.22□□□□□ -0.45
VEGFA-224ENST00000523873 CELSR3Q9NYQ7 3312 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 MED13Q9UHV7 2174 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 A0A0A6YYC8 382 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-224ENST00000523873 A0A1B0GX78 115 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 CCDC151A5D8V7 595 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 STX16-NPEPL1H3BU86 382 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 I3L1I5 382 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-224ENST00000523873 E2F3O00716 465 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 COPEO14579 308 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 STX16O14662 325 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 NDUFS4O43181 175 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 FOXS1O43638 330 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 CNOT3O75175 753 aaKnown RBP12.21□□□□□ -0.45
VEGFA-224ENST00000523873 H2AFYO75367 372 aaKnown RBP12.21□□□□□ -0.45
VEGFA-224ENST00000523873 SPAG7O75391 227 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 ERLIN1O75477 346 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 B3GALT4O96024 378 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 PROCP04070 461 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 GSTA1P08263 222 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 TSPAN8P19075 237 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 AGXTP21549 392 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 IRF8Q02556 426 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 SLC18A2Q05940 514 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 MLIPQ5VWP3 458 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 ZNF517Q6ZMY9 492 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-224ENST00000523873 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 COX15Q7KZN9 410 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 PRSS41Q7RTY9 318 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 IQCKQ8N0W5 287 aa12.21□□□□□ -0.45
VEGFA-224ENST00000523873 ARHGEF39Q8N4T4 335 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms